RNA–Protein interactions for RNA: ENST00000584541.1

RFFL-211, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-211ENST00000584541 MTA2O94776 668 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 FYNP06241 537 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 GJA1P17302 382 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 PGFP49763 221 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 ZNF143P52747 638 aaPredicted RBP19.13■□□□□ 0.65
RFFL-211ENST00000584541 HADHBP55084 474 aaKnown RBP19.13■□□□□ 0.65
RFFL-211ENST00000584541 FNIP1Q8TF40 1166 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 TCEAL4Q96EI5 215 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 NECTIN4Q96NY8 510 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 DDX23Q9BUQ8 820 aaKnown RBP19.13■□□□□ 0.65
RFFL-211ENST00000584541 CCSER2Q9H7U1 834 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 LZTFL1Q9NQ48 299 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 GUCA1BQ9UMX6 200 aa19.13■□□□□ 0.65
RFFL-211ENST00000584541 HELZP42694 1942 aaKnown RBP19.13■□□□□ 0.65
RFFL-211ENST00000584541 DENND4AQ7Z401 1863 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 TRAV19A0A0A6YYK7 116 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.12■□□□□ 0.65
RFFL-211ENST00000584541 MACROD2A1Z1Q3 448 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 DPYSL4O14531 572 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 OAS1P00973 400 aaKnown RBP19.12■□□□□ 0.65
RFFL-211ENST00000584541 KCNA5P22460 613 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 PSMA2P25787 234 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 GBP1P32455 592 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 CCR2P41597 374 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 ARHGAP25P42331 645 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 PTPN9P43378 593 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SULT1E1P49888 294 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 PIGHQ14442 188 aaPredicted RBP19.12■□□□□ 0.65
RFFL-211ENST00000584541 TEAD2Q15562 447 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 CLUL1Q15846 466 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SLC5A9Q2M3M2 681 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SLC25A52Q3SY17 297 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 GPR158Q5T848 1215 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SYPL2Q5VXT5 272 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 TXNDC8Q6A555 127 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 MSANTD2Q6P1R3 559 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 KLHDC10Q6PID8 442 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 RNF10Q8N5U6 811 aaKnown RBP19.12■□□□□ 0.65
RFFL-211ENST00000584541 SMRP1Q8NCR6 262 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 HLA-CQ95604 372 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 CFAP57Q96MR6 1250 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 CNPY3Q9BT09 278 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SMOC2Q9H3U7 446 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 SLITRK6Q9H5Y7 841 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 TASP1Q9H6P5 420 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 FAM204AQ9H8W3 233 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 TMEM51Q9NW97 253 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 TRMT1Q9NXH9 659 aaKnown RBP19.12■□□□□ 0.65
RFFL-211ENST00000584541 DNMT3LQ9UJW3 386 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 COG5Q9UP83 839 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 DUSP10Q9Y6W6 482 aa19.12■□□□□ 0.65
RFFL-211ENST00000584541 NUP210Q8TEM1 1887 aaPredicted RBP19.11■□□□□ 0.65
RFFL-211ENST00000584541 A0A0U1RQJ8 604 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 C2orf78A6NCI8 922 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 H3BQ06 376 aaPredicted RBP19.11■□□□□ 0.65
RFFL-211ENST00000584541 BUB1O43683 1085 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 RNF8O76064 485 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 HDCP19113 662 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 EFEMP1Q12805 493 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 ACAP1Q15027 740 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 SND1Q7KZF4 910 aaKnown RBP eCLIP19.11■□□□□ 0.65
RFFL-211ENST00000584541 CCAR2Q8N163 923 aaKnown RBP19.11■□□□□ 0.65
RFFL-211ENST00000584541 MAB21L3Q8N8X9 362 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 DQX1Q8TE96 717 aaKnown RBP19.11■□□□□ 0.65
RFFL-211ENST00000584541 ATRIPQ8WXE1 791 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 ING5Q8WYH8 240 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 SERPINB11Q96P15 392 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 NPY6RQ99463 290 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 NCAPGQ9BPX3 1015 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 MARCH2Q9P0N8 246 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 TRIM10Q9UDY6 481 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 RASAL2Q9UJF2 1139 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 NUDT5Q9UKK9 219 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 ZKSCAN5Q9Y2L8 839 aa19.11■□□□□ 0.65
RFFL-211ENST00000584541 M0QYT0 321 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 COCHO43405 550 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 MOSPD3O75425 235 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 TRUB2O95900 331 aaKnown RBP19.1■□□□□ 0.65
RFFL-211ENST00000584541 F9P00740 461 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 CKMP06732 381 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 MBL2P11226 248 aaPredicted RBP19.1■□□□□ 0.65
RFFL-211ENST00000584541 CEBPBP17676 345 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 KPNA1P52294 538 aaPredicted RBP19.1■□□□□ 0.65
RFFL-211ENST00000584541 ATP11AP98196 1134 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 MESDQ14696 234 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 CDO1Q16878 200 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 CCDC14Q49A88 953 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 TRNP1Q6NT89 227 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 GET4Q7L5D6 327 aaPredicted RBP19.1■□□□□ 0.65
RFFL-211ENST00000584541 STRADAQ7RTN6 431 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 GADD45GIP1Q8TAE8 222 aaPredicted RBP19.1■□□□□ 0.65
RFFL-211ENST00000584541 ITFG1Q8TB96 612 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 KIAA1524Q8TCG1 905 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 BTBD6Q96KE9 485 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 TRIM7Q9C029 511 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 DDIT4Q9NX09 232 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 SFMBT1Q9UHJ3 866 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 PAXBP1Q9Y5B6 917 aa19.1■□□□□ 0.65
RFFL-211ENST00000584541 TMEM110-MUSTN1A8MSY1 372 aa19.09■□□□□ 0.65
RFFL-211ENST00000584541 TBX18O95935 607 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms