RNA–Protein interactions for RNA: ENST00000584186.1

CDK5RAP3-233, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 482 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-233ENST00000584186 DYNC1LI1Q9Y6G9 523 aaKnown RBP14.31□□□□□ -0.12
CDK5RAP3-233ENST00000584186 XPO1O14980 1071 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 STC2O76061 302 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 GNA14O95837 355 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 AFPP02771 609 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TYRP14679 529 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ADIGQ0VDE8 80 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BST2Q10589 180 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KCNH2Q12809 1159 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CCDC6Q16204 474 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CRY1Q16526 586 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PREPLQ4J6C6 727 aaPredicted RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RAB41Q5JT25 222 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 C10orf76Q5T2E6 689 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 GRAMD4Q6IC98 578 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 NUDT18Q6ZVK8 323 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DGLUCYQ7Z3D6 616 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ETFBKMTQ8IXQ9 262 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PHTF2Q8N3S3 785 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 UBR7Q8N806 425 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 IL17RCQ8NAC3 791 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 XPO6Q96QU8 1125 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ARRDC1-AS1Q9H2J1 176 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 MARCH2Q9P0N8 246 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 WDR35Q9P2L0 1181 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EBF1Q9UH73 591 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CDV3Q9UKY7 258 aaKnown RBP14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KIAA1257Q9ULG3 409 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 STRIP2Q9ULQ0 834 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 MYOFQ9NZM1 2061 aa14.3□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LAMA1P25391 3075 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DNAH14Q0VDD8 3507 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SLC12A8A0AV02 714 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PRR5-ARHGAP8B1AHC4 643 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RNF225M0QZC1 329 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SGK1O00141 431 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 O00370 1275 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PMM2O15305 246 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 FGFR1OPO95684 399 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CALCAP01258 141 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KLKB1P03952 638 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LCP1P13796 627 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CORO1AP31146 461 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 GBP1P32455 592 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KIR2DL1P43626 348 aaPredicted RBP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RGS7P49802 495 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 COG7P83436 770 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ARHGAP8P85298 464 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PUM1Q14671 1186 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 USP39Q53GS9 565 aaKnown RBP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EOGTQ5NDL2 527 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 FOXR2Q6PJQ5 311 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TMEM92Q6UXU6 159 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ARHGEF19Q8IW93 802 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TRIM59Q8IWR1 403 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SIX6OS1Q8N1H7 587 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TRIML1Q8N9V2 468 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EHBP1Q8NDI1 1231 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 MDGA1Q8NFP4 955 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LMO3Q8TAP4 145 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TFAP2BQ92481 460 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PLK2Q9NYY3 685 aa14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BCCIPQ9P287 314 aaKnown RBP eCLIP14.29□□□□□ -0.12
CDK5RAP3-233ENST00000584186 A0A0A0MRY4 1105 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 M0QYV0 167 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PIK3R2O00459 728 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 P4HA2O15460 535 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LRP3O75074 770 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ALDH1A2O94788 518 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PAEPP09466 180 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 SETSIPP0DME0 302 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KRT5P13647 590 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HNRNPLP14866 589 aaKnown RBP eCLIP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 BRD2P25440 801 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 WASP42768 502 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ELF2Q15723 593 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 CSRP2Q16527 193 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PLK5Q496M5 336 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PM20D1Q6GTS8 502 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 LCLAT1Q6UWP7 414 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 Q6ZNB5 142 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PRR23CQ6ZRP0 262 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 KIAA1549LQ6ZVL6 1849 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ERMP1Q7Z2K6 904 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DENND1CQ8IV53 801 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 PGBD3Q8N328 593 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ZNF276Q8N554 614 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ZNF513Q8N8E2 541 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 TERB1Q8NA31 727 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RBBP8NLQ8NC74 664 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RNF139Q8WU17 664 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 HMGB4Q8WW32 186 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 EDEM1Q92611 657 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 ERLEC1Q96DZ1 483 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 INTS2Q9H0H0 1204 aaKnown RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 POLMQ9NP87 494 aaPredicted RBP14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 DLL3Q9NYJ7 618 aa14.28□□□□□ -0.12
CDK5RAP3-233ENST00000584186 RWDD2AQ9UIY3 292 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms