RNA–Protein interactions for RNA: ENST00000584112.1

CCDC47-206, Transcript of coiled-coil domain containing 47, humanhuman

TSL 2

Gene CCDC47, Length 588 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-206ENST00000584112 RPN1P04843 607 aaKnown RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 P4HA1P13674 534 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 HLA-EP13747 358 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 PTPN1P18031 435 aaKnown RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 PPP3CCP48454 512 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 CASP4P49662 377 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 NDUFA8P51970 172 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 CLDN10P78369 228 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 GFPT1Q06210 699 aaPredicted RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 RUNX3Q13761 415 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 NCOA4Q13772 614 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 DMC1Q14565 340 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 MTF1Q14872 753 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF699Q32M78 642 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 C2orf27AQ580R0 203 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF667Q5HYK9 610 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 C6orf132Q5T0Z8 1188 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 ARHGAP40Q5TG30 622 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 TDRD10Q5VZ19 366 aaKnown RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 B3GALNT2Q8NCR0 500 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 RLN3Q8WXF3 142 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 TTC9Q92623 222 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 LIN37Q96GY3 246 aaPredicted RBP11.82□□□□□ -0.52
CCDC47-206ENST00000584112 C8orf48Q96LL4 319 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 XYLT2Q9H1B5 865 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 CAPN10Q9HC96 672 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 TRPM5Q9NZQ8 1165 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 FRMD4BQ9Y2L6 1034 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 PCNX1Q96RV3 2341 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 CSMD1Q96PZ7 3565 aa11.82□□□□□ -0.52
CCDC47-206ENST00000584112 BSNQ9UPA5 3926 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 F8VP50 259 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TNFRSF10BO14763 440 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 MAPK13O15264 365 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 GJB3O75712 270 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 RHOBTB3O94955 611 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 C4BPAP04003 597 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 HDCP19113 662 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 NOP14P78316 857 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 GRSF1Q12849 480 aaKnown RBP eCLIP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 NFATC3Q12968 1075 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 USP4Q13107 963 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 ZNF77Q15935 545 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 GLRX5Q86SX6 157 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 C11orf74Q86VG3 221 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 SPACA3Q8IXA5 215 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 CPA6Q8N4T0 437 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 PLEKHO2Q8TD55 490 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TMC2Q8TDI7 906 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TAF4BQ92750 862 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 ATP2A3Q93084 1043 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TNIP3Q96KP6 325 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 PSMG3-AS1Q96PY0 264 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 PHF12Q96QT6 1004 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TTLL2Q9BWV7 592 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 EBF3Q9H4W6 596 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 CPNE5Q9HCH3 593 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 FBRSL1Q9HCM7 1045 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 HPS4Q9NQG7 708 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 DUS2Q9NX74 493 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 GCNT4Q9P109 453 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 PILRBQ9UKJ0 227 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 PCOLCE2Q9UKZ9 415 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TRAF3IP3Q9Y228 551 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 HEMK1Q9Y5R4 338 aaPredicted RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 SPENQ96T58 3664 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 TLN1Q9Y490 2541 aaKnown RBP11.81□□□□□ -0.52
CCDC47-206ENST00000584112 NAV3Q8IVL0 2385 aa11.81□□□□□ -0.52
CCDC47-206ENST00000584112 CELSR2Q9HCU4 2923 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 TRDMT1O14717 391 aaKnown RBP11.8□□□□□ -0.52
CCDC47-206ENST00000584112 IKBKBO14920 756 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 TCF3P15923 654 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 TRIM21P19474 475 aaKnown RBP11.8□□□□□ -0.52
CCDC47-206ENST00000584112 RPL13P26373 211 aaKnown RBP11.8□□□□□ -0.52
CCDC47-206ENST00000584112 IFNAR2P48551 515 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 DPYDQ12882 1025 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 NR1H3Q13133 447 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 BECN1Q14457 450 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 NFIL3Q16649 462 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 SGSM1Q2NKQ1 1148 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 PKDCCQ504Y2 493 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 TMEM196Q5HYL7 178 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 CEP135Q66GS9 1140 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 TRIM68Q6AZZ1 485 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 KRBA2Q6ZNG9 492 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 LPCAT2Q7L5N7 544 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 GALNT15Q8N3T1 639 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 ARL14EPQ8N8R7 260 aaPredicted RBP11.8□□□□□ -0.52
CCDC47-206ENST00000584112 RPLP0P6Q8NHW5 317 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 SH3RF2Q8TEC5 729 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 OSCP1Q8WVF1 389 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 SLITRK1Q96PX8 696 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 CYP2S1Q96SQ9 504 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 FAM117AQ9C073 453 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 DPEP3Q9H4B8 488 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 SMYD3Q9H7B4 428 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 PRDM16Q9HAZ2 1276 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 CIZ1Q9ULV3 898 aaPredicted RBP11.8□□□□□ -0.52
CCDC47-206ENST00000584112 ARHGAP26Q9UNA1 814 aa11.8□□□□□ -0.52
CCDC47-206ENST00000584112 MAN2B2Q9Y2E5 1009 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms