RNA–Protein interactions for RNA: ENST00000583879.5

VAPA-207, Transcript of VAMP associated protein A, humanhuman

TSL 2

Gene VAPA, Length 719 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-207ENST00000583879 ADAMTS14Q8WXS8 1223 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 LARP4BQ92615 738 aaKnown RBP5.68□□□□□ -1.5
VAPA-207ENST00000583879 HVCN1Q96D96 273 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 POM121Q96HA1 1249 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 SYT15Q9BQS2 421 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 RUBCNLQ9H714 662 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 PRDM16Q9HAZ2 1276 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 CAPN10Q9HC96 672 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 RBAKQ9NYW8 714 aaPredicted RBP5.68□□□□□ -1.5
VAPA-207ENST00000583879 TBC1D14Q9P2M4 693 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 SIX4Q9UIU6 781 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 ITGA11Q9UKX5 1188 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 DOLKQ9UPQ8 538 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 EXOC7Q9UPT5 735 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 R3HCC1Q9Y3T6 440 aaKnown RBP5.68□□□□□ -1.5
VAPA-207ENST00000583879 KIF3AQ9Y496 699 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 CPQQ9Y646 472 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 RALGAPA1Q6GYQ0 2036 aa5.68□□□□□ -1.5
VAPA-207ENST00000583879 ATXN2Q99700 1313 aaKnown RBP5.68□□□□□ -1.5
VAPA-207ENST00000583879 SDK1Q7Z5N4 2213 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PDCD11Q14690 1871 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 KRTAP9-6A0A140TA67 174 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 A0A1W2PQD8 194 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 E2F8A0AVK6 867 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PALM2-AKAP2B1ALY0 433 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 SCAMP3O14828 347 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 SH3BP5O60239 455 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ZNF217O75362 1048 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 OAS1P00973 400 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 FAM163BP0C2L3 166 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 EPXP11678 715 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ADH5P11766 374 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 GABRG2P18507 467 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PTMSP20962 102 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 GARTP22102 1010 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 LONP1P36776 959 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 PSMC1P62191 440 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 GRIN1Q05586 938 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 TAF10Q12962 218 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 MYO1EQ12965 1108 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 RESTQ13127 1097 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 DOC2BQ14184 412 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PREPLQ4J6C6 727 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 SOWAHCQ53LP3 525 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 LY6G5CQ5SRR4 150 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 L1TD1Q5T7N2 865 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 TDRD10Q5VZ19 366 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 BTBD8Q5XKL5 378 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 C19orf48Q6RUI8 117 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CCNI2Q6ZMN8 369 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 TRMT11Q7Z4G4 463 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 SFR1Q86XK3 245 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 DDX42Q86XP3 938 aaKnown RBP eCLIP5.67□□□□□ -1.5
VAPA-207ENST00000583879 ETFBKMTQ8IXQ9 262 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PHTF2Q8N3S3 785 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ZNF513Q8N8E2 541 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 NAT16Q8N8M0 369 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 TRIML1Q8N9V2 468 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 RASSF8Q8NHQ8 419 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 MYCBPAPQ8TBZ2 947 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 KBTBD7Q8WVZ9 684 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 MYLPFQ96A32 169 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 OTUB2Q96DC9 234 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 SAAL1Q96ER3 474 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ABHD17AQ96GS6 310 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 PCED1BQ96HM7 432 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ZNF419Q96HQ0 510 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 HPDLQ96IR7 371 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 C8orf48Q96LL4 319 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CAMK1GQ96NX5 476 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 SLITRK1Q96PX8 696 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ACCSQ96QU6 501 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 TTLL2Q9BWV7 592 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 FAM124BQ9H5Z6 455 aaPredicted RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 MRPL44Q9H9J2 332 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 PDE11AQ9HCR9 933 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ZDHHC4Q9NPG8 344 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CRTAC1Q9NQ79 661 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 DNAAF2Q9NVR5 837 aaKnown RBP5.67□□□□□ -1.5
VAPA-207ENST00000583879 SMPD4Q9NXE4 827 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CALCOCO1Q9P1Z2 691 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CFAP97Q9P2B7 532 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 DEC1Q9P2X7 70 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 SEL1LQ9UBV2 794 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 HCN2Q9UL51 889 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 STARD13Q9Y3M8 1113 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 CACNA1GO43497 2377 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 ZZEF1O43149 2961 aa5.67□□□□□ -1.5
VAPA-207ENST00000583879 NUP210Q8TEM1 1887 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 WDFY3Q8IZQ1 3526 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 CITO14578 2027 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 IGHV1OR15-9A0A0B4J2B8 117 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 A0A1W2PQF6 199 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GOLGA8IPA6NC78 632 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 GOLGA8JA6NMD2 632 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 F8VP50 259 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 H3BQV1 296 aa5.66□□□□□ -1.5
VAPA-207ENST00000583879 KIAA0391O15091 583 aaKnown RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 HOXC11O43248 304 aaPredicted RBP5.66□□□□□ -1.5
VAPA-207ENST00000583879 COCHO43405 550 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms