RNA–Protein interactions for RNA: ENST00000583517.1

NLK-204, Transcript of nemo like kinase, humanhuman

TSL 3

Gene NLK, Length 695 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLK-204ENST00000583517 USP25Q9UHP3 1055 aa12.52□□□□□ -0.41
NLK-204ENST00000583517 LSM7Q9UK45 103 aaKnown RBP12.52□□□□□ -0.41
NLK-204ENST00000583517 HPSEQ9Y251 543 aa12.52□□□□□ -0.41
NLK-204ENST00000583517 FRMD4BQ9Y2L6 1034 aa12.52□□□□□ -0.41
NLK-204ENST00000583517 PCDHA5Q9Y5H7 936 aa12.52□□□□□ -0.41
NLK-204ENST00000583517 ATXN2Q99700 1313 aaKnown RBP12.52□□□□□ -0.41
NLK-204ENST00000583517 A0A1B0GVL5 298 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 A0A1W2PQH9 124 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 PRRT4C9JH25 899 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 CILPO75339 1184 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 NDUFV2P19404 249 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 TRIM21P19474 475 aaKnown RBP12.51□□□□□ -0.41
NLK-204ENST00000583517 ACO1P21399 889 aaKnown RBP12.51□□□□□ -0.41
NLK-204ENST00000583517 CMA1P23946 247 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 WASP42768 502 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 MAPK8P45983 427 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 VAMP7P51809 220 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 KIF11P52732 1056 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 ENPEPQ07075 957 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 GOLGA8FQ08AF8 430 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 GOLGA8DPQ0D2H9 430 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 FOXC1Q12948 553 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 UAP1L1Q3KQV9 507 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 KIAA1211LQ6NV74 962 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 UNQ6494/PRO21346Q6UXR6 183 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 SLC36A4Q6YBV0 504 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 TPGS1Q6ZTW0 290 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 TOGARAM2Q6ZUX3 1019 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 HSCBQ8IWL3 235 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 CHPFQ8IZ52 775 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 ZNF276Q8N554 614 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 DEFB124Q8NES8 71 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 CEP76Q8TAP6 659 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 P2RY11Q96G91 374 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 XPO6Q96QU8 1125 aaKnown RBP12.51□□□□□ -0.41
NLK-204ENST00000583517 BBS2Q9BXC9 721 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 NT5C1AQ9BXI3 368 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 TMEM121BQ9BXQ6 578 aaPredicted RBP12.51□□□□□ -0.41
NLK-204ENST00000583517 CYP3A43Q9HB55 503 aa12.51□□□□□ -0.41
NLK-204ENST00000583517 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 MYO18AQ92614 2054 aaKnown RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 ASCC3Q8N3C0 2202 aaKnown RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 IGHV1OR15-9A0A0B4J2B8 117 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 UPK3BL1B0FP48 263 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 C1QTNF9BB2RNN3 333 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 UPK3BL2E5RIL1 263 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 MDM4O15151 490 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 CALUO43852 315 aaPredicted RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 ZNF217O75362 1048 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 RHOBTB3O94955 611 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 HSP90AA1P07900 732 aaKnown RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 SERPINF2P08697 491 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 CISD3P0C7P0 127 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 C1QTNF9P0C862 333 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 TRIM49P0CI25 452 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 TRIM49CP0CI26 452 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 RARGP13631 454 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 NR2F2P24468 414 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 PLA2G4AP47712 749 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 GCLMP48507 274 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 PSEN1P49768 467 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 MCCD1P59942 119 aaPredicted RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 PPP3CAQ08209 521 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 DUOXA1Q1HG43 343 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 SDE2Q6IQ49 451 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 INTS8Q75QN2 995 aaKnown RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 SCD5Q86SK9 330 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 PIP4P1Q86T03 277 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 KDF1Q8NAX2 398 aaPredicted RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 TAS1R2Q8TE23 839 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 IPO4Q8TEX9 1081 aaKnown RBP12.5□□□□□ -0.41
NLK-204ENST00000583517 JAKMIP2Q96AA8 810 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 IMPG2Q9BZV3 1241 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 NIF3L1Q9GZT8 377 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 CAPN10Q9HC96 672 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 UTP3Q9NQZ2 479 aaKnown RBP eCLIP12.5□□□□□ -0.41
NLK-204ENST00000583517 DNMT3LQ9UJW3 386 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 FBXO10Q9UK96 956 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 SLC6A14Q9UN76 642 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 USP3Q9Y6I4 520 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 GON4LQ3T8J9 2241 aa12.5□□□□□ -0.41
NLK-204ENST00000583517 LOC400499M0QZD8 3231 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 ZFYVE26Q68DK2 2539 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 PCDH15Q96QU1 1955 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 FAM237AA0A1B0GTK4 181 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 GFRA2O00451 464 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 STC2O76061 302 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 KIF20AO95235 890 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 TOP3BO95985 862 aaKnown RBP12.49□□□□□ -0.41
NLK-204ENST00000583517 CFIP05156 583 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 SPINK2P20155 84 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 DGKGP49619 791 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 ZNF33AQ06730 810 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 SEMA3BQ13214 749 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 C10orf120Q5SQS8 335 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 RABEPKQ7Z6M1 372 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 SLC41A1Q8IVJ1 513 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 DUSP16Q9BY84 665 aa12.49□□□□□ -0.41
NLK-204ENST00000583517 ADAM33Q9BZ11 813 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms