RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 OAZ2O95190 189 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 TOMM40O96008 361 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CRYABP02511 175 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 PDGFRBP09619 1106 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 PARP1P09874 1014 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 NTSR1P30989 418 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 THBS3P49746 956 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 GATMP50440 423 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 RPS13P62277 151 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CFHR3Q02985 330 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ARHGEF7Q14155 803 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CNN3Q15417 329 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 NPY5RQ15761 445 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ZNF750Q32MQ0 723 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 CYB5RLQ6IPT4 315 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 KIAA1161Q6NSJ0 714 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 C9orf47Q6ZRZ4 202 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ACRBPQ8NEB7 543 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 KAZALD1Q96I82 304 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 MARK4Q96L34 752 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 TRIM36Q9NQ86 728 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 TYW1Q9NV66 732 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 GAR1Q9NY12 217 aaKnown RBP4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ZIM2Q9NZV7 527 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 TONSLQ96HA7 1378 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 FGD6Q6ZV73 1430 aa4.88□□□□□ -1.63
SMCHD1-208ENST00000583344 ARHGEF11O15085 1522 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 CFAP69A5D8W1 941 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 FYB1O15117 783 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 ME1P48163 572 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 KRTAP10-7P60409 375 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 RPS16P62249 146 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 IGBP1P78318 339 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 KPNB1Q14974 876 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 COLCA1Q6ZS62 124 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 C16orf71Q8IYS4 520 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 KIAA0319LQ8IZA0 1049 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 ARFGAP1Q8N6T3 406 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 C12orf76Q8N812 135 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 RUNDC1Q96C34 613 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 SUCLG2Q96I99 432 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 TMEM60Q9H2L4 133 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 USP29Q9HBJ7 922 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 DDX56Q9NY93 547 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 AFF4Q9UHB7 1163 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 MID2Q9UJV3 735 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 ZSCAN21Q9Y5A6 473 aaPredicted RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 HS3ST3B1Q9Y662 390 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 NAIPQ13075 1403 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 PTPRKQ15262 1439 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 KDM5BQ9UGL1 1544 aa4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 PCF11O94913 1555 aaKnown RBP4.87□□□□□ -1.63
SMCHD1-208ENST00000583344 B4DGG1 531 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 RFPL1O75677 317 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 IL1R1P14778 569 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 ZKSCAN1P17029 563 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 ACVR2AP27037 513 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 ANAPC15P60006 121 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 KRTAP10-6P60371 365 aaPredicted RBP4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 GPC5P78333 572 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 MTX1Q13505 466 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 SLC9C1Q4G0N8 1177 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 TMEM63BQ5T3F8 832 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 USP49Q70CQ1 688 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 NMD3Q96D46 503 aaKnown RBP4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 HIC2Q96JB3 615 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 ZFYVE19Q96K21 471 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 FAM234AQ9H0X4 552 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 ZBTB40Q9NUA8 1239 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 MAFFQ9ULX9 164 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 PTPN23Q9H3S7 1636 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 CUL7Q14999 1698 aa4.86□□□□□ -1.63
SMCHD1-208ENST00000583344 A8MVJ9 347 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 FAM227AF5H4B4 570 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 CA12O43570 354 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 PRAMEF2O60811 474 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 ADRA1DP25100 572 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 TACR3P29371 465 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 CPT1AP50416 773 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 SLC29A2Q14542 456 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 KCNAB1Q14722 419 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 PIM3Q86V86 326 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 PNPLA1Q8N8W4 532 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 WIPF2Q8TF74 440 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 CAMK1GQ96NX5 476 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 SCNM1Q9BWG6 230 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 DHX36Q9H2U1 1008 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 COL20A1Q9P218 1284 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 NKX1-2Q9UD57 310 aaPredicted RBP4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 FZD4Q9ULV1 537 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 NOB1Q9ULX3 412 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 AKNAQ7Z591 1439 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 TCOF1Q13428 1488 aaKnown RBP4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 NCOA2Q15596 1464 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 SNAPC4Q5SXM2 1469 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 CCDC18Q5T9S5 1454 aa4.85□□□□□ -1.63
SMCHD1-208ENST00000583344 DNMBPQ6XZF7 1577 aa4.84□□□□□ -1.63
SMCHD1-208ENST00000583344 GRIN2BQ13224 1484 aa4.84□□□□□ -1.63
SMCHD1-208ENST00000583344 FHOD3Q2V2M9 1422 aa4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms