RNA–Protein interactions for RNA: ENST00000583080.1

SREBF1-221, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 5

Gene SREBF1, Length 482 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-221ENST00000583080 FTH1P19P0C7X4 201 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 DGKGP49619 791 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SNRPFP62306 86 aaKnown RBP17.06■□□□□ 0.32
SREBF1-221ENST00000583080 GRIK2Q13002 908 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 TRIP6Q15654 476 aaKnown RBP17.06■□□□□ 0.32
SREBF1-221ENST00000583080 BMT2Q1RMZ1 405 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SDE2Q6IQ49 451 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SHC4Q6S5L8 630 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 UNC13DQ70J99 1090 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 NAXDQ8IW45 347 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 C12orf56Q8IXR9 622 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 PNPLA1Q8N8W4 532 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 XPO6Q96QU8 1125 aaKnown RBP17.06■□□□□ 0.32
SREBF1-221ENST00000583080 C7orf25Q9BPX7 421 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 CSNK1G1Q9HCP0 422 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SLC39A2Q9NP94 309 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 CYLDQ9NQC7 956 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 TLR8Q9NR97 1041 aaKnown RBP17.06■□□□□ 0.32
SREBF1-221ENST00000583080 FOXD4L1Q9NU39 408 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 PLK2Q9NYY3 685 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 NUDT5Q9UKK9 219 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 ITPR1Q14643 2758 aa17.06■□□□□ 0.32
SREBF1-221ENST00000583080 SPTLC2O15270 562 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 ZBTB24O43167 697 aaPredicted RBP17.05■□□□□ 0.32
SREBF1-221ENST00000583080 NDUFS2O75306 463 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 C4BPAP04003 597 aaKnown RBP17.05■□□□□ 0.32
SREBF1-221ENST00000583080 CISD3P0C7P0 127 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 ADORA2BP29275 332 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 RDXP35241 583 aaKnown RBP17.05■□□□□ 0.32
SREBF1-221ENST00000583080 NDST1P52848 882 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 AMPD3Q01432 767 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 SCAPQ12770 1279 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 C12orf29Q8N999 325 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 PARD3BQ8TEW8 1205 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 FBXO44Q9H4M3 255 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 NMUR1Q9HB89 426 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 WDR35Q9P2L0 1181 aa17.05■□□□□ 0.32
SREBF1-221ENST00000583080 LSM7Q9UK45 103 aaKnown RBP17.05■□□□□ 0.32
SREBF1-221ENST00000583080 ADAMTS20P59510 1910 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-221ENST00000583080 HHLA1C9JL84 531 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 DLG4P78352 724 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 CLDN10P78369 228 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 HNRNPDQ14103 355 aaKnown RBP17.04■□□□□ 0.32
SREBF1-221ENST00000583080 SPOPLQ6IQ16 392 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 C19orf48Q6RUI8 117 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 Q6ZNB5 142 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 CLEC20AQ6ZU45 233 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 ZCCHC9Q8N567 271 aaKnown RBP17.04■□□□□ 0.32
SREBF1-221ENST00000583080 IQUBQ8NA54 791 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 SPRYD3Q8NCJ5 442 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 ADAMTS14Q8WXS8 1223 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 TWNKQ96RR1 684 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
SREBF1-221ENST00000583080 TFIP11Q9UBB9 837 aaKnown RBP17.04■□□□□ 0.32
SREBF1-221ENST00000583080 SUSD2Q9UGT4 822 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 GPSM3Q9Y4H4 160 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 LAMA5O15230 3695 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 PLXNB3Q9ULL4 1909 aa17.04■□□□□ 0.32
SREBF1-221ENST00000583080 NBEAQ8NFP9 2946 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 A0A1W2PQH9 124 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 MEI4A8MW99 385 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 PPP6R2O75170 966 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 FAM200BP0CF97 657 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 CD6P30203 668 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 ATP5C1P36542 298 aaKnown RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 ASPAP45381 313 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 SLC14A1Q13336 389 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 KNOP1Q1ED39 458 aaKnown RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 FUT11Q495W5 492 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 SYCP2LQ5T4T6 812 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 TOE1Q96GM8 510 aaKnown RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 MKRN2Q9H000 416 aaKnown RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 ZSCAN16Q9H4T2 348 aaPredicted RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 IL21RQ9HBE5 538 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 MTPAPQ9NVV4 582 aaKnown RBP eCLIP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 CGNQ9P2M7 1197 aaKnown RBP17.03■□□□□ 0.32
SREBF1-221ENST00000583080 SCML2Q9UQR0 700 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 PCDHB9Q9Y5E1 797 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 STON1Q9Y6Q2 735 aa17.03■□□□□ 0.32
SREBF1-221ENST00000583080 KCNJ18B7U540 433 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GFRA2O00451 464 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 STX6O43752 255 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 CBFA2T3O75081 653 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 RARGP13631 454 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GNSP15586 552 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 ACO1P21399 889 aaKnown RBP17.02■□□□□ 0.32
SREBF1-221ENST00000583080 IL12RB1P42701 662 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GOLGA8FQ08AF8 430 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GOLGA8DPQ0D2H9 430 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 CUL4BQ13620 913 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 WDR45BQ5MNZ6 344 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 SLCO6A1Q86UG4 719 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 CACUL1Q86Y37 369 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GRAMD1CQ8IYS0 662 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 CRYBG2Q8N1P7 616 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 FOXJ1Q92949 421 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 GPR174Q9BXC1 333 aa17.02■□□□□ 0.32
SREBF1-221ENST00000583080 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.02■□□□□ 0.32
SREBF1-221ENST00000583080 WSB2Q9NYS7 404 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms