RNA–Protein interactions for RNA: ENST00000582539.5

TRAPPC8-211, Transcript of trafficking protein particle complex 8, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC8, Length 4,391 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC8-211ENST00000582539 LUC7L3O95232 432 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FAM107AO95990 144 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SNRPAP09012 282 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CYP2F1P24903 491 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 GRIK1P39086 918 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ZNF200P98182 395 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 NAA30Q147X3 362 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 TAF1BQ53T94 588 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 PPP6R3Q5H9R7 873 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SPANXN3Q5MJ09 141 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 RNF187Q5TA31 235 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CYP4A22Q5TCH4 519 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 NPAS4Q8IUM7 802 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 XPO7Q9UIA9 1087 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 LSM7Q9UK45 103 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CFAP73A6NFT4 308 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 PFKLP17858 780 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 MMP13P45452 471 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 RPL21P46778 160 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CTCFP49711 727 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 LILRA4P59901 499 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 PKN2Q16513 984 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CDO1Q16878 200 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SKIDA1Q1XH10 827 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ANKRD20A8PQ5CZ79 823 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SPOUT1Q5T280 376 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ATPAF2Q8N5M1 289 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 CCNYQ8ND76 341 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ZNF398Q8TD17 642 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ADAM2Q99965 735 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 HSFX1Q9UBD0 423 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ARVCFO00192 962 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 PITPNM1O00562 1244 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 TREHO43280 583 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ITGBL1O95965 494 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 POLBP06746 335 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 GRK4P32298 578 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 RFC1P35251 1148 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC11A2P49281 568 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 MON1AQ86VX9 555 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 DDX42Q86XP3 938 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FBXO25Q8TCJ0 367 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 VPS39Q96JC1 886 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FAM49BQ9NUQ9 324 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 TFR2Q9UP52 801 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 C5orf60A6NFR6 353 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 RASA4BC9J798 803 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 M0QYT0 321 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 RASA4O43374 803 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FAM189A1O60320 539 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 ASGR1P07306 291 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 L1CAMP32004 1257 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 MAGOHP61326 146 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SEZ6Q53EL9 994 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 DCAF6Q58WW2 860 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 MDH1BQ5I0G3 518 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 HIBCHQ6NVY1 386 aaPredicted RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FAM228AQ86W67 206 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC2A14Q8TDB8 520 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 XPO6Q96QU8 1125 aaKnown RBP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 OSBPL2Q9H1P3 480 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FGFR1OP2Q9NVK5 253 aa10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP10.49□□□□□ -0.73
TRAPPC8-211ENST00000582539 A0A0A0MRY4 1105 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 SDR42E2A6NKP2 422 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 INPPL1O15357 1258 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 GCATO75600 419 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 RAP1GAPP47736 663 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 ACLYP53396 1101 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 DYNLT1P63172 113 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PPP2R5DQ14738 602 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 CASC4Q6P4E1 433 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 CTAGE3PQ8IX95 158 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PPHLN1Q8NEY8 458 aaKnown RBP10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC35B2Q8TB61 432 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC35F5Q8WV83 523 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 SPATA13Q96N96 652 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 GJD2Q9UKL4 321 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 SLC8A2Q9UPR5 921 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 INPP5FQ9Y2H2 1132 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 TIMM44O43615 452 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 GSTA1P08263 222 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 CPB1P15086 417 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 TRADDQ15628 312 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 KCNA10Q16322 511 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PABPC1LQ4VXU2 614 aaKnown RBP10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 ANKS1BQ7Z6G8 1248 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 ANKLE1Q8NAG6 615 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 DEPDC1BQ8WUY9 529 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PGAP3Q96FM1 320 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 C8orf48Q96LL4 319 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 QKIQ96PU8 341 aaKnown RBP eCLIP10.48□□□□□ -0.732e-8■■■■■ 54.1
TRAPPC8-211ENST00000582539 CDC42EP4Q9H3Q1 356 aaKnown RBP10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 ZNF180Q9UJW8 692 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 TMCO1Q9UM00 188 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 DNM1LO00429 736 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 LRCH4O75427 683 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PDGFRBP09619 1106 aa10.48□□□□□ -0.73
TRAPPC8-211ENST00000582539 PCSK2P16519 638 aa10.48□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms