RNA–Protein interactions for RNA: ENST00000582331.2

CCDC47-205, Transcript of coiled-coil domain containing 47, humanhuman

TSL 3

Gene CCDC47, Length 693 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-205ENST00000582331 FIZ1Q96SL8 496 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 LLPHQ9BRT6 129 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 SLC6A16Q9GZN6 736 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 ST6GALNAC4Q9H4F1 302 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 CRTAC1Q9NQ79 661 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 ITM2CQ9NQX7 267 aa8.09□□□□□ -1.11
CCDC47-205ENST00000582331 DNAJC17Q9NVM6 304 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 MYO18AQ92614 2054 aaKnown RBP8.09□□□□□ -1.11
CCDC47-205ENST00000582331 A0A1B0GVT2 93 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 METTL12A8MUP2 240 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 PRRT4C9JH25 899 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 PLK4O00444 970 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 COCHO43405 550 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 SLC26A4O43511 780 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 LDHAP00338 332 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 WARSP23381 471 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 YWHAQP27348 245 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 ADSSP30520 456 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 OXTRP30559 389 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 HMGN5P82970 282 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 CFHR1Q03591 330 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 MYO1EQ12965 1108 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 PTPRNQ16849 979 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 HECTD3Q5T447 861 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 DCAF12L1Q5VU92 463 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 DHRS13Q6UX07 377 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 HS2ST1Q7LGA3 356 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 GPR155Q7Z3F1 870 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 TMPRSS12Q86WS5 348 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 BRSK2Q8IWQ3 736 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 NUP93Q8N1F7 819 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 CXorf38Q8TB03 319 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 KBTBD7Q8WVZ9 684 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 FBXO32Q969P5 355 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 HVCN1Q96D96 273 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 NXPE2Q96DL1 559 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 CALML4Q96GE6 196 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 FCRL3Q96P31 734 aaPredicted RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 DUSP9Q99956 384 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 IKZF4Q9H2S9 585 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 RBAKQ9NYW8 714 aaPredicted RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 USP36Q9P275 1121 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 WDR35Q9P2L0 1181 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 CHORDC1Q9UHD1 332 aaPredicted RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 EIF2B4Q9UI10 523 aaKnown RBP8.08□□□□□ -1.12
CCDC47-205ENST00000582331 SIX4Q9UIU6 781 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 BTBD3Q9Y2F9 522 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 ASXL3Q9C0F0 2248 aa8.08□□□□□ -1.12
CCDC47-205ENST00000582331 TEX51A0A1B0GUA7 166 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 WASH3PC4AMC7 463 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 CACNG3O60359 315 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 RTN3O95197 1032 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-205ENST00000582331 TMEM191BP0C7N4 346 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 IRF1P10914 325 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 TYRP14679 529 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 JUPP14923 745 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 GNL1P36915 607 aaPredicted RBP8.07□□□□□ -1.12
CCDC47-205ENST00000582331 UBA7P41226 1012 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 GRK6P43250 576 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 ZNF132P52740 706 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 SEMG2Q02383 582 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 MCM6Q14566 821 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 STARD3Q14849 445 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 NFKBIBQ15653 356 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 FUT11Q495W5 492 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 MDH1BQ5I0G3 518 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 C6orf118Q5T5N4 469 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 ZNF720Q7Z2F6 126 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 LIMS2Q7Z4I7 341 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 KRI1Q8N9T8 703 aaKnown RBP8.07□□□□□ -1.12
CCDC47-205ENST00000582331 ZSWIM2Q8NEG5 633 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 C1orf216Q8TAB5 229 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 OVCA2Q8WZ82 227 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 BAP1Q92560 729 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 WBP2Q969T9 261 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 SAAL1Q96ER3 474 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 HPDLQ96IR7 371 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 ANKRD36BP1Q96IX9 119 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 FAM84AQ96KN4 292 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 MMS19Q96T76 1030 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 SPSB2Q99619 263 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 BBS2Q9BXC9 721 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 MTMR12Q9C0I1 747 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 ELOVL4Q9GZR5 314 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 NACA2Q9H009 215 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 BLOC1S4Q9NUP1 217 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 LIMCH1Q9UPQ0 1083 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 EXOC7Q9UPT5 735 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 SNX11Q9Y5W9 270 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 AK5Q9Y6K8 562 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 STON1Q9Y6Q2 735 aa8.07□□□□□ -1.12
CCDC47-205ENST00000582331 GOLGA8IPA6NC78 632 aa8.06□□□□□ -1.12
CCDC47-205ENST00000582331 GOLGA8JA6NMD2 632 aa8.06□□□□□ -1.12
CCDC47-205ENST00000582331 KCNJ18B7U540 433 aa8.06□□□□□ -1.12
CCDC47-205ENST00000582331 NEDD8-MDP1E9PL57 170 aa8.06□□□□□ -1.12
CCDC47-205ENST00000582331 TLX3O43711 291 aaPredicted RBP8.06□□□□□ -1.12
CCDC47-205ENST00000582331 CD2BP2O95400 341 aaKnown RBP8.06□□□□□ -1.12
CCDC47-205ENST00000582331 CISD3P0C7P0 127 aa8.06□□□□□ -1.12
CCDC47-205ENST00000582331 PTPN1P18031 435 aaKnown RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms