RNA–Protein interactions for RNA: ENST00000582308.1

RFFL-210, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene RFFL, Length 398 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-210ENST00000582308 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP9.97□□□□□ -0.81
RFFL-210ENST00000582308 ANAPC7Q9UJX3 599 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 GUCA1BQ9UMX6 200 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 MYO10Q9HD67 2058 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 MYOFQ9NZM1 2061 aa9.97□□□□□ -0.81
RFFL-210ENST00000582308 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 MYO1FO00160 1098 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 DPYSL4O14531 572 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 CAPN9O14815 690 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 MDM4O15151 490 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 COCHO43405 550 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 KRT86O43790 486 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 BUB1BO60566 1050 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 TLR5O60602 858 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 MOCS3O95396 460 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 FGF19O95750 216 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 OAS1P00973 400 aaKnown RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 RALAP11233 206 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 GPD1P21695 349 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 ZNF143P52747 638 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 ITIH3Q06033 890 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 TEAD2Q15562 447 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 CLUL1Q15846 466 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 C15orf59Q2T9L4 293 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 SLC25A52Q3SY17 297 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 CCDC14Q49A88 953 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 ARHGAP29Q52LW3 1261 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 RAB6CQ53S08 254 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 C10orf120Q5SQS8 335 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 HECTD3Q5T447 861 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 STXBP5Q5T5C0 1151 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 SH3PXD2AQ5TCZ1 1133 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 OTUD1Q5VV17 481 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 TXNDC8Q6A555 127 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 PDZD4Q76G19 769 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 CPNE8Q86YQ8 564 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 RNF10Q8N5U6 811 aaKnown RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 ARFGAP1Q8N6T3 406 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 ITFG1Q8TB96 612 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 ADAM32Q8TC27 787 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 DQX1Q8TE96 717 aaKnown RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 FNIP1Q8TF40 1166 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 PPM1EQ8WY54 764 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 MRPS31Q92665 395 aaKnown RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 CENPIQ92674 756 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 GOLGA1Q92805 767 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 CFAP57Q96MR6 1250 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 SLC22A12Q96S37 553 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 TBCBQ99426 244 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 CNPY3Q9BT09 278 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 TRIM62Q9BVG3 475 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 IRX2Q9BZI1 471 aaPredicted RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 RNF38Q9H0F5 515 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 RAB6CQ9H0N0 254 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 ATXN3LQ9H3M9 355 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 WDR6Q9NNW5 1121 aaKnown RBP9.96□□□□□ -0.82
RFFL-210ENST00000582308 CALCOCO1Q9P1Z2 691 aa9.96□□□□□ -0.82
RFFL-210ENST00000582308 GRID2IPA4D2P6 1211 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 TMEM110-MUSTN1A8MSY1 372 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 H3BQ06 376 aaPredicted RBP9.95□□□□□ -0.82
RFFL-210ENST00000582308 ZNF197O14709 1029 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CCP110O43303 1012 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ENDOD1O94919 500 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 IGLV3-25P01717 112 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CEBPBP17676 345 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 FSHRP23945 695 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 PSMA2P25787 234 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 SDC4P31431 198 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 PTPN9P43378 593 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 TUBP50607 506 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ATP11AP98196 1134 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 EFEMP1Q12805 493 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 MESDQ14696 234 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CDO1Q16878 200 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ATAT1Q5SQI0 421 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CES5AQ6NT32 575 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 KLHDC10Q6PID8 442 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 RSRC2Q7L4I2 434 aaKnown RBP9.95□□□□□ -0.82
RFFL-210ENST00000582308 BNIPLQ7Z465 357 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 TAC4Q86UU9 113 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 NIPA2Q8N8Q9 360 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ARL14EPQ8N8R7 260 aaPredicted RBP9.95□□□□□ -0.82
RFFL-210ENST00000582308 MAB21L3Q8N8X9 362 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 LRRC57Q8N9N7 239 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 SMRP1Q8NCR6 262 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 RNF139Q8WU17 664 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ING5Q8WYH8 240 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 ZSWIM3Q96MP5 696 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 GCNAQ96QF7 691 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CYP2S1Q96SQ9 504 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 SLC46A2Q9BY10 475 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 SMOC2Q9H3U7 446 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 GOLPH3Q9H4A6 298 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 UBE2ZQ9H832 354 aaPredicted RBP9.95□□□□□ -0.82
RFFL-210ENST00000582308 TRPC7Q9HCX4 862 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 RRN3Q9NYV6 651 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 MARCH2Q9P0N8 246 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 IP6K2Q9UHH9 426 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 SFMBT1Q9UHJ3 866 aa9.95□□□□□ -0.82
RFFL-210ENST00000582308 CD207Q9UJ71 328 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms