RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, human

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDK5RAP3-222	ENST00000581708	CACNG3	O60359	315 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	STC2	O76061	302 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	FBXO21	O94952	628 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	IRF1	P10914	325 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	DGKE	P52429	567 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MFAP3	P55082	362 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ZNF445	P59923	1031 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	DMC1	Q14565	340 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	NAIF1	Q69YI7	327 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GBP6	Q6ZN66	633 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RSRC2	Q7L4I2	434 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TMEM25	Q86YD3	366 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	PHTF2	Q8N3S3	785 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	STK32A	Q8WU08	396 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GAB3	Q8WWW8	586 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	PLD4	Q96BZ4	506 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GBP4	Q96PP9	640 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TRIM62	Q9BVG3	475 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	IRX2	Q9BZI1	471 aa	Predicted RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ULBP1	Q9BZM6	244 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ABCC13	Q9NSE7	274 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	C2orf42	Q9NWW7	574 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MARCH2	Q9P0N8	246 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	STARD13	Q9Y3M8	1113 aa		13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	HBS1L	Q9Y450	684 aa	Known RBP	13.2	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	AXIN1	O15169	862 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TULP3	O75386	442 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RPP40	O75818	363 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ALDH1A2	O94788	518 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	LATS1	O95835	1130 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	KIR2DL1	P43626	348 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ADIG	Q0VDE8	80 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TPD52L1	Q16890	204 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ANO4	Q32M45	955 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	EOGT	Q5NDL2	527 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TRIM65	Q6PJ69	517 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RRAGA	Q7L523	313 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	BHLHA9	Q7RTU4	235 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CACNA2D4	Q7Z3S7	1137 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RASSF3	Q86WH2	238 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MIB1	Q86YT6	1006 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	IRF2BP1	Q8IU81	584 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CPXM2	Q8N436	756 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TERB1	Q8NA31	727 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RNF139	Q8WU17	664 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TFAP2B	Q92481	460 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ZC3H10	Q96K80	434 aa	Known RBP	13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	KREMEN1	Q96MU8	473 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MED15	Q96RN5	788 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	BBS2	Q9BXC9	721 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	UBE2T	Q9NPD8	197 aa	Predicted RBP	13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CEP250	Q9BV73	2442 aa		13.19	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CACNA1A	O00555	2505 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	DMXL1	Q9Y485	3027 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TBC1D3B	A6NDS4	549 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	PRR5-ARHGAP8	B1AHC4	643 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GOLGA6L22	H0YM25	854 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RNF225	M0QZC1	329 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	NPC1	O15118	1278 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CHRM1	P11229	460 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TYR	P14679	529 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ACADSB	P45954	432 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	SLC6A11	P48066	632 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RPL34	P49207	117 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	DAOA	P59103	153 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ARHGAP8	P85298	464 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	LMNB2	Q03252	620 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	DMWD	Q09019	674 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	EFEMP1	Q12805	493 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TRIP4	Q15650	581 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CRY1	Q16526	586 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MAN2A1	Q16706	1144 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	EXOC3L4	Q17RC7	722 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	C2orf27A	Q580R0	203 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	BSPRY	Q5W0U4	402 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	HEATR6	Q6AI08	1181 aa	Known RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GRAMD4	Q6IC98	578 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MSANTD2	Q6P1R3	559 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	PRR23B	Q6ZRT6	265 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	CEP68	Q76N32	757 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	BEND5	Q7L4P6	421 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	C12orf40	Q86WS4	652 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ARHGEF19	Q8IW93	802 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	FAM217A	Q8IXS0	508 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	IL17RC	Q8NAC3	791 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	TSTD1	Q8NFU3	115 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	UBA3	Q8TBC4	463 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	GOLGA1	Q92805	767 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	KAT5	Q92993	513 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	WBP2	Q969T9	261 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	SLC2A11	Q9BYW1	496 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	LMBRD1	Q9NUN5	540 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	APEX2	Q9UBZ4	518 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	RASAL2	Q9UJF2	1139 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	FBXO10	Q9UK96	956 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	SLC27A6	Q9Y2P4	619 aa		13.18	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	ATG2B	Q96BY7	2078 aa		13.17	□□□□□ -0.3
CDK5RAP3-222	ENST00000581708	MYOF	Q9NZM1	2061 aa		13.17	□□□□□ -0.3

Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms