RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 PROP1O75360 226 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 NTSR2O95665 410 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 GLP2RO95838 553 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 ITGA5P08648 1049 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 NR2F6P10588 404 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 GYS1P13807 737 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 VEGFAP15692 232 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 GRIA3P42263 894 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 PDE1AP54750 535 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 PRKG1Q13976 671 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 POSTNQ15063 836 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 PTPRRQ15256 657 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 SRSF7Q16629 238 aaKnown RBP eCLIP5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 TIGD6Q17RP2 521 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 C4orf46Q504U0 113 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 ZNF618Q5T7W0 954 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 LIN54Q6MZP7 749 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 DPY19L3Q6ZPD9 716 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 SMAP1Q8IYB5 467 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 SUN3Q8TAQ9 357 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 TRAPPC12Q8WVT3 735 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 SOCS4Q8WXH5 440 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 RFKQ969G6 155 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 TRIM63Q969Q1 353 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 DPCDQ9BVM2 203 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 TMEM120AQ9BXJ8 343 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 EHD3Q9NZN3 535 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 CCNL1Q9UK58 526 aaPredicted RBP5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 WNT6Q9Y6F9 365 aa5.44□□□□□ -1.54
SMCHD1-205ENST00000581383 PNMA6EA0A0J9YXQ4 647 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 CCDC189A1A4V9 331 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 WDR27A2RRH5 827 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 OR2W5A6NFC9 320 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 PSMD9O00233 223 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 IPO5O00410 1097 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 RBMXL2O75526 392 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 ANXA6P08133 673 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 ZFXP17010 805 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 KLRK1P26718 216 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 ALDH18A1P54886 795 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 NHLH1Q02575 133 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 FOXO1Q12778 655 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 BIRC3Q13489 604 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 GRM4Q14833 912 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 TXNRD1Q16881 649 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 TMEM95Q3KNT9 176 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 TEDDM1Q5T9Z0 273 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 KLHL17Q6TDP4 642 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 ZNF788Q6ZQV5 615 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 PTF1AQ7RTS3 328 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 AMIGO2Q86SJ2 522 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 GLCCI1Q86VQ1 547 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 LRRC71Q8N4P6 559 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 STT3BQ8TCJ2 826 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 PPM1EQ8WY54 764 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 EID2BQ96D98 161 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 NKX1-2Q9UD57 310 aaPredicted RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 HERC5Q9UII4 1024 aaKnown RBP5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 DGKBQ9Y6T7 804 aa5.43□□□□□ -1.54
SMCHD1-205ENST00000581383 COL15A1P39059 1388 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 NPHP1O15259 732 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 ITGA2BP08514 1039 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 DHRS4L1P0CG22 281 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 CD19P15391 556 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 AKT1P31749 480 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 HTR7P34969 479 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 BMPR2Q13873 1038 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 TAF5Q15542 800 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 TRIM71Q2Q1W2 868 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 P3H1Q32P28 736 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 HSP90AB4PQ58FF6 505 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 KIAA0895LQ68EN5 471 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 RINT1Q6NUQ1 792 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 RAB11FIP4Q86YS3 637 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 CCDC117Q8IWD4 279 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 SUGP1Q8IWZ8 645 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 SRRM1Q8IYB3 904 aaKnown RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 GALNT15Q8N3T1 639 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 FAM167BQ9BTA0 163 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 LDHAL6BQ9BYZ2 381 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 TP63Q9H3D4 680 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 MLXIPQ9HAP2 919 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 FSCN3Q9NQT6 498 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 ITM2CQ9NQX7 267 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 ARPP21Q9UBL0 812 aaPredicted RBP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 LPAR3Q9UBY5 353 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 NOL12Q9UGY1 213 aaKnown RBP eCLIP5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 STEAP1Q9UHE8 339 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 GPR52Q9Y2T5 361 aa5.42□□□□□ -1.54
SMCHD1-205ENST00000581383 MANSC4A6NHS7 340 aaPredicted RBP5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 HMX3A6NHT5 357 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 AP4M1O00189 453 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 PMPCBO75439 489 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 TAF5LO75529 589 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ACTL6BO94805 426 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 WDR47O94967 919 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 NXPH3O95157 252 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 TTLL1O95922 423 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 ONECUT2O95948 504 aa5.41□□□□□ -1.54
SMCHD1-205ENST00000581383 TMEM225BP0DP42 221 aa5.41□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms