RNA–Protein interactions for RNA: ENST00000580287.5

CDK5RAP3-217, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 1 (best)

Gene CDK5RAP3, Length 2,609 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-217ENST00000580287 SCN4BQ8IWT1 228 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCT8L2Q96SF2 557 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MRPL9Q9BYD2 267 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ULBP1Q9BZM6 244 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SEMA4AQ9H3S1 761 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 COX16Q9P0S2 106 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PRKAG2Q9UGJ0 569 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MRPL42Q9Y6G3 142 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HHLA1C9JL84 531 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 AMHP03971 560 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RFC2P35250 354 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC8A3P57103 927 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TSPY1Q01534 308 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADCY2Q08462 1091 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CYP1B1Q16678 543 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 QPCTQ16769 361 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KCNT2Q6UVM3 1135 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 STK32AQ8WU08 396 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 AUTS2Q8WXX7 1259 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RAPGEF5Q92565 580 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RUNDC3BQ96NL0 473 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CRISPLD1Q9H336 500 aa13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 NGRNQ9NPE2 291 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 R3HDM2Q9Y2K5 976 aaKnown RBP13.23□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SZT2Q5T011 3432 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SF3B1O75533 1304 aaKnown RBP eCLIP13.22□□□□□ -0.291e-11■■■■■ 43.1
CDK5RAP3-217ENST00000580287 YJEFN3A6XGL0 299 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 E7ENQ6 273 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PPFIA2O75334 1257 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KRT10P13645 584 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MIPP30301 263 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GRIK1P39086 918 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SYPL2Q5VXT5 272 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DENND2CQ68D51 928 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SCYL2Q6P3W7 929 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SPATA2LQ8IUW3 424 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ADAM32Q8TC27 787 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZNF689Q96CS4 500 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SMARCD1Q96GM5 515 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HSFY1Q96LI6 401 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PWWP2AQ96N64 755 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PEBP4Q96S96 227 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 LRRC19Q9H756 370 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IL23AQ9NPF7 189 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MICAL3Q7RTP6 2002 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PSTPIP1O43586 416 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CD48P09326 243 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GPD1P21695 349 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FGFR3P22607 806 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MNAT1P51948 309 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DRG2P55039 364 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GSCP56915 257 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PIGHQ14442 188 aaPredicted RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC29A2Q14542 456 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CCDC38Q502W7 563 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FAM182AQ5T1J6 154 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 PRUNE1Q86TP1 453 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 NLRP14Q86W24 1093 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SIX6OS1Q8N1H7 587 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZNF473Q8WTR7 871 aaKnown RBP13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 MAIP1Q8WWC4 291 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 EDEM1Q92611 657 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IGSF21Q96ID5 467 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 OSBPL8Q9BZF1 889 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 EPN3Q9H201 632 aa13.22□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GAS8O95995 478 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 KRT1P04264 644 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DNAJB2P25686 324 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CETN2P41208 172 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZNF143P52747 638 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 IFI35P80217 286 aaPredicted RBP13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DCAF6Q58WW2 860 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GSTA5Q7RTV2 222 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SPRED2Q7Z698 418 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 DEFB106AQ8N104 65 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 HSPH1Q92598 858 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TTPALQ9BTX7 342 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 ZCWPW1Q9H0M4 648 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 RC3H2Q9HBD1 1191 aaKnown RBP13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 TMPRSS4Q9NRS4 437 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 GPATCH2LQ9NWQ4 482 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 SLC12A6Q9UHW9 1150 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 NAALADL1Q9UQQ1 740 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 CDY1Q9Y6F8 540 aa13.21□□□□□ -0.29
CDK5RAP3-217ENST00000580287 FGBP02675 491 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 CPB1P15086 417 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MRPS5P82675 430 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SLC25A11Q02978 314 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 TAP1Q03518 808 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 IFT88Q13099 833 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 MRPL58Q14197 206 aaKnown RBP13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 SPRED3Q2MJR0 410 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 RNF19BQ6ZMZ0 732 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 C12orf50Q8NA57 414 aaPredicted RBP13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 FAM172AQ8WUF8 416 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DCLK3Q9C098 648 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.3
CDK5RAP3-217ENST00000580287 PABPC3Q9H361 631 aaKnown RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms