RNA–Protein interactions for RNA: ENST00000580222.5

LIMD2-209, Transcript of LIM domain containing 2, humanhuman

TSL 3

Gene LIMD2, Length 846 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-209ENST00000580222 IL18RAPO95256 599 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 EPB41P11171 864 aaKnown RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 POLR2BP30876 1174 aaKnown RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 EIF2DP41214 584 aaKnown RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 POU5F1Q01860 360 aaKnown RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 LY6G5CQ5SRR4 150 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 GLRX5Q86SX6 157 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 SPATA2LQ8IUW3 424 aaPredicted RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 ZC3H3Q8IXZ2 948 aaKnown RBP20.51■□□□□ 0.87
LIMD2-209ENST00000580222 FAM186BQ8IYM0 893 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 CEP63Q96MT8 703 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 ACOX2Q99424 681 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 AGAP1Q9UPQ3 857 aa20.51■□□□□ 0.87
LIMD2-209ENST00000580222 ZNF462Q96JM2 2506 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 SLC16A3O15427 465 aaKnown RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 FGFR1OPO95684 399 aaKnown RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 OLFM2O95897 454 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 ADH5P11766 374 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 PSMC2P35998 433 aaKnown RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 CYP24A1Q07973 514 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 GRIK2Q13002 908 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 FAM171BQ6P995 826 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 TMPRSS7Q7RTY8 843 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 RABEPKQ7Z6M1 372 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 ETFBKMTQ8IXQ9 262 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 C1orf127Q8N9H9 656 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 ZNF419Q96HQ0 510 aaPredicted RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 MED15Q96RN5 788 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 SRRTQ9BXP5 876 aaKnown RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 DKK4Q9UBT3 224 aa20.5■□□□□ 0.87
LIMD2-209ENST00000580222 APOBEC2Q9Y235 224 aaKnown RBP20.5■□□□□ 0.87
LIMD2-209ENST00000580222 TBC1D3BA6NDS4 549 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 TRABD2BA6NFA1 517 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 GABRDO14764 452 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 MAPK13O15264 365 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 ITGB3P05106 788 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 ATXN1LP0C7T5 689 aaKnown RBP20.49■□□□□ 0.87
LIMD2-209ENST00000580222 KRT13P13646 458 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 NDUFV2P19404 249 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 LMO2P25791 158 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 MAGEA11P43364 429 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 CAMK2BQ13554 666 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 SURF1Q15526 300 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 CCDC40Q4G0X9 1142 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 ZNF513Q8N8E2 541 aaPredicted RBP20.49■□□□□ 0.87
LIMD2-209ENST00000580222 SPATA17Q96L03 361 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 PDE11AQ9HCR9 933 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 TRPM5Q9NZQ8 1165 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 PLXND1Q9Y4D7 1925 aa20.49■□□□□ 0.87
LIMD2-209ENST00000580222 A0A087WV48 116 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 HUS1O60921 280 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 HOXB2P14652 356 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 BDNFP23560 247 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 PSMC1P62191 440 aaKnown RBP20.48■□□□□ 0.87
LIMD2-209ENST00000580222 MYL7Q01449 175 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 BNC1Q01954 994 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 MYL5Q02045 173 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 C19orf57Q0VDD7 668 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 PSMD6Q15008 389 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 SOWAHAQ2M3V2 549 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 RGL4Q8IZJ4 473 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 AOPEPQ8N6M6 819 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 ENOX1Q8TC92 643 aaKnown RBP20.48■□□□□ 0.87
LIMD2-209ENST00000580222 WBP2Q969T9 261 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 FUBP3Q96I24 572 aaKnown RBP eCLIP20.48■□□□□ 0.87
LIMD2-209ENST00000580222 ZNF560Q96MR9 790 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 TTLL2Q9BWV7 592 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 CRTAC1Q9NQ79 661 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 KIAA1522Q9P206 1035 aaPredicted RBP20.48■□□□□ 0.87
LIMD2-209ENST00000580222 ANAPC1Q9H1A4 1944 aa20.48■□□□□ 0.87
LIMD2-209ENST00000580222 HELZP42694 1942 aaKnown RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 FAM149AA5PLN7 773 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 TULP3O75386 442 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 DKK1O94907 266 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 ADH1CP00326 375 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 OAS1P00973 400 aaKnown RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 DLATP10515 647 aaKnown RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 PNPLA4P41247 253 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 ZNF165P49910 485 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 TFAMQ00059 246 aaKnown RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 EGFLAMQ63HQ2 1017 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 INTS8Q75QN2 995 aaKnown RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 TMEM86AQ8N2M4 240 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 BAHD1Q8TBE0 780 aaPredicted RBP20.47■□□□□ 0.87
LIMD2-209ENST00000580222 MYLPFQ96A32 169 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 CCDC127Q96BQ5 260 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 CGRRF1Q99675 332 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 TSPY26PQ9H489 355 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 TMEM30AQ9NV96 361 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 SIX4Q9UIU6 781 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 NFE2L3Q9Y4A8 694 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 SNX9Q9Y5X1 595 aa20.47■□□□□ 0.87
LIMD2-209ENST00000580222 SLC9A3R1O14745 358 aaPredicted RBP20.46■□□□□ 0.87
LIMD2-209ENST00000580222 GNA14O95837 355 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 ABL1P00519 1130 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 TMEM191BP0C7N4 346 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 PFKLP17858 780 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 PDE6CP51160 858 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 CACNA2D1P54289 1103 aa20.46■□□□□ 0.87
LIMD2-209ENST00000580222 C10orf76Q5T2E6 689 aa20.46■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms