RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 ZWINTO95229 277 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ALDH3A1P30838 453 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 PCK1P35558 622 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 PITX1P78337 314 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 RFX8Q6ZV50 586 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 ARMCX6Q7L4S7 300 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 L3MBTL3Q96JM7 780 aaPredicted RBP10.89□□□□□ -0.67
TOP3A-209ENST00000580095 TSSK1BQ9BXA7 367 aa10.89□□□□□ -0.67
TOP3A-209ENST00000580095 FAM237BA0A1B0GVD1 139 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 A8MXQ7 604 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ADCY6O43306 1168 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ATP2A2P16615 1042 aaKnown RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CYP2F1P24903 491 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SERPINB3P29508 390 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CPA2P48052 419 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SLC26A2P50443 739 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 GRIK4Q16099 956 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SOWAHAQ2M3V2 549 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 PRAMEF19Q5SWL8 479 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CES4AQ5XG92 561 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 RFWD3Q6PCD5 774 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CLNKQ7Z7G1 428 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TRIM74Q86UV6 250 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TRIM73Q86UV7 250 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 FAM131BQ86XD5 332 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 EXOC8Q8IYI6 725 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CCDC185Q8N715 623 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ARMC2Q8NEN0 867 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SLC44A1Q8WWI5 657 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CYP3A43Q9HB55 503 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TXLNGQ9NUQ3 528 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 MAGED2Q9UNF1 606 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 A0A1B0GUA9 196 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ENDOD1O94919 500 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 UPP2O95045 317 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CSH1P0DML2 217 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CSH2P0DML3 217 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 AMPD1P23109 780 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 HOXA11P31270 313 aaPredicted RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ATICP31939 592 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 STIP1P31948 543 aaKnown RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TNFAIP2Q03169 654 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ZBTB16Q05516 673 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 INCA1Q0VD86 236 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 OLIG2Q13516 323 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TFDP2Q14188 446 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 FYB2Q5VWT5 728 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ZCCHC23Q6ZST2 131 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TP53INP2Q8IXH6 220 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 FAM13CQ8NE31 585 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SRPK1Q96SB4 655 aaKnown RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 LGMNQ99538 433 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 RNF39Q9H2S5 420 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CYLDQ9NQC7 956 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ARL8BQ9NVJ2 186 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 TTLL3Q9Y4R7 772 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SCN1AP35498 2009 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 WDR90Q96KV7 1748 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CXCL11O14625 94 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 OSBPP22059 807 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 RIPK1Q13546 671 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ZNF484Q5JVG2 852 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CASC4Q6P4E1 433 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 DENND5BQ6ZUT9 1274 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 CATSPER4Q7RTX7 472 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 POPDC2Q9HBU9 364 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SPON1Q9HCB6 807 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 PCMTD2Q9NV79 361 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 ITGA11Q9UKX5 1188 aa10.88□□□□□ -0.67
TOP3A-209ENST00000580095 MRPL42Q9Y6G3 142 aaKnown RBP10.88□□□□□ -0.67
TOP3A-209ENST00000580095 SPTLC1O15269 473 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 DCTN3O75935 186 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 TROVE2P10155 538 aaKnown RBP eCLIP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 GOT1P17174 413 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SESN3P58005 492 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SLC6A3Q01959 620 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 LAMC2Q13753 1193 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 KCNT2Q6UVM3 1135 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CES3Q6UWW8 571 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 UNC5AQ6ZN44 842 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 RGS9BPQ6ZS82 235 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CTU1Q7Z7A3 348 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 ALYREFQ86V81 257 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 MAP7D3Q8IWC1 876 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SLC35F5Q8WV83 523 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 FAM149B1Q96BN6 582 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 MIPEPQ99797 713 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SH3GL3Q99963 347 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 TMEM120AQ9BXJ8 343 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 IQCGQ9H095 443 aaKnown RBP10.87□□□□□ -0.67
TOP3A-209ENST00000580095 NRDE2Q9H7Z3 1164 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SEPT10Q9P0V9 454 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 HESX1Q9UBX0 185 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 PTPRFP10586 1907 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 IQANK1A0A1B0GTG1 560 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 CLDN5O00501 218 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 COPEO14579 308 aa10.87□□□□□ -0.67
TOP3A-209ENST00000580095 SMPD1P17405 629 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms