RNA–Protein interactions for RNA: ENST00000579853.5

CDK5RAP3-216, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 714 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-216ENST00000579853 PTPRJQ12913 1337 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FRMD3A2A2Y4 597 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PRRT4C9JH25 899 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TRIM24O15164 1050 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TLR5O60602 858 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CILPO75339 1184 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GABBR2O75899 941 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 IRF1P10914 325 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TNNI1P19237 187 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CLCN6P51797 869 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CASP5P51878 434 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CCDC73Q6ZRK6 1079 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ZCCHC9Q8N567 271 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SCAMP5Q8TAC9 235 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SMARCD1Q96GM5 515 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GPR174Q9BXC1 333 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MIR1-1HGQ9H1L0 117 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TLR8Q9NR97 1041 aaKnown RBP12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PANK4Q9NVE7 773 aa12.91□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SHROOM3Q8TF72 1996 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TRABD2BA6NFA1 517 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 METTL12A8MUP2 240 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CLDN5O00501 218 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CST3P01034 146 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DLATP10515 647 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ATICP31939 592 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ATP5C1P36542 298 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 ABCG1P45844 678 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CYP4F3Q08477 520 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TRPC3Q13507 836 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SNRNP35Q16560 246 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 HLA-BQ31612 363 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 LARP1BQ659C4 914 aaKnown RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 FAM35AQ86V20 835 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CBWD2Q8IUF1 395 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 CCDC65Q8IXS2 484 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 UCMAQ8WVF2 138 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SYAP1Q96A49 352 aaPredicted RBP12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 KCNK16Q96T55 309 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MED10Q9BTT4 135 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 NUP58Q9BVL2 599 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 DPEP3Q9H4B8 488 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 HSPBP1Q9NZL4 362 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 GMIPQ9P107 970 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 SLC27A6Q9Y2P4 619 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 RAD54BQ9Y620 910 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 MYH10P35580 1976 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 PIEZO2Q9H5I5 2752 aa12.9□□□□□ -0.34
CDK5RAP3-216ENST00000579853 TNFSF14O43557 240 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SYNCRIPO60506 623 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 IGLV3-19P01714 112 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CISD3P0C7P0 127 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ATXN1LP0C7T5 689 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ACADMP11310 421 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TPMTP51580 245 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 AFF3P51826 1226 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 INAVAQ3KP66 663 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FUT11Q495W5 492 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 DCAF12L1Q5VU92 463 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TPGS1Q6ZTW0 290 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 USP49Q70CQ1 688 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 LSM14AQ8ND56 463 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PRCCQ92733 491 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SIPA1Q96FS4 1042 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CGRRF1Q99675 332 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 KLF16Q9BXK1 252 aaPredicted RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 LRRC27Q9C0I9 530 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SLC6A17Q9H1V8 727 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CD93Q9NPY3 652 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CYLDQ9NQC7 956 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TOR4AQ9NXH8 423 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FBXO10Q9UK96 956 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 FNDC3AQ9Y2H6 1198 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ZNF510Q9Y2H8 683 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 NME7Q9Y5B8 376 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SRPRBQ9Y5M8 271 aaKnown RBP12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 STON1Q9Y6Q2 735 aa12.89□□□□□ -0.35
CDK5RAP3-216ENST00000579853 WASH3PC4AMC7 463 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 GREM1O60565 184 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 AP1G2O75843 785 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TRIM21P19474 475 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 GRK6P43250 576 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SNRPFP62306 86 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ORC1Q13415 861 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 CAMK2BQ13554 666 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ENPP2Q13822 863 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 PSMD6Q15008 389 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TEAD4Q15561 434 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 SMAD1Q15797 465 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 KLHDC10Q6PID8 442 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TADA2BQ86TJ2 420 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 TMPRSS6Q8IU80 811 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ADAM32Q8TC27 787 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 WBP2Q969T9 261 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 ERLEC1Q96DZ1 483 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 MKRN2Q9H000 416 aaKnown RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 VRTNQ9H8Y1 702 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 IL21RQ9HBE5 538 aa12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 THAP10Q9P2Z0 257 aaPredicted RBP12.88□□□□□ -0.35
CDK5RAP3-216ENST00000579853 NXF1Q9UBU9 619 aaKnown RBP12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms