RNA–Protein interactions for RNA: ENST00000579316.5

CSNK1D-211, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 692 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-211ENST00000579316 CACNA2D1P54289 1103 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 TARDBPQ13148 414 aaKnown RBP eCLIP14.69□□□□□ -0.063e-6■■■■□ 20.8
CSNK1D-211ENST00000579316 ORC1Q13415 861 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 POSTNQ15063 836 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 HTR3DQ70Z44 454 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 GPBP1Q86WP2 473 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 ERICH1Q86X53 443 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 TMPRSS6Q8IU80 811 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 CACTIN-AS1Q8N1I8 211 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 CSGALNACT2Q8N6G5 542 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 POMGNT1Q8WZA1 660 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 SIPA1Q96FS4 1042 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 ZSCAN31Q96LW9 406 aaPredicted RBP14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 PLIN2Q99541 437 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 BBS2Q9BXC9 721 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 SEMA4CQ9C0C4 833 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 NUMA1Q14980 2115 aa14.69□□□□□ -0.06
CSNK1D-211ENST00000579316 ENC1O14682 589 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 DFNA5O60443 496 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 BRINP1O60477 761 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 RTN3O95197 1032 aaPredicted RBP14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 ZDHHC11BP0C7U3 371 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 C7P10643 843 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 ACTN2P35609 894 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 CTSKP43235 329 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 DGKGP49619 791 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 CLDN6P56747 220 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 TBC1D25Q3MII6 688 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 HES3Q5TGS1 186 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 FBXL19Q6PCT2 694 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 NUP93Q8N1F7 819 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 CDK5RAP3Q96JB5 506 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 FAM84AQ96KN4 292 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 TRIM9Q9C026 710 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 ELOVL4Q9GZR5 314 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 CCSER2Q9H7U1 834 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 TM9SF3Q9HD45 589 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 EIF4ENIF1Q9NRA8 985 aaKnown RBP14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 THAP10Q9P2Z0 257 aaPredicted RBP14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 FBXO10Q9UK96 956 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 MYLKQ15746 1914 aa14.68□□□□□ -0.06
CSNK1D-211ENST00000579316 FLNCQ14315 2725 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 PYCARD-AS1I3L0S3 204 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 SLC26A4O43511 780 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 KRT19P08727 400 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 ACO1P21399 889 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 ACADVLP49748 655 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 COPAP53621 1224 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 CCDC173Q0VFZ6 552 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 GNL2Q13823 731 aaKnown RBP14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 MDH1BQ5I0G3 518 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 PRCCQ92733 491 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 FBXO32Q969P5 355 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 HVCN1Q96D96 273 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 FAM213AQ9BRX8 229 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 IKZF4Q9H2S9 585 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 RBAKQ9NYW8 714 aaPredicted RBP14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 IL37Q9NZH6 218 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 SLC27A6Q9Y2P4 619 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 LRRK2Q5S007 2527 aa14.67□□□□□ -0.06
CSNK1D-211ENST00000579316 MYO9AB2RTY4 2548 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 A0A1B0GTQ1 180 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 FAM92AA1XBS5 289 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 KCNK3O14649 394 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 PPP1R37O75864 691 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 PDGFRBP09619 1106 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 CSRP3P50461 194 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 UCNP55089 124 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 TMPRSS3P57727 454 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 KCNH2Q12809 1159 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 KCNT1Q5JUK3 1230 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 USP49Q70CQ1 688 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 SNRNP27Q8WVK2 155 aaKnown RBP14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 TSC1Q92574 1164 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 TTC9Q92623 222 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 HPDLQ96IR7 371 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 ZNF518BQ9C0D4 1074 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 MTMR12Q9C0I1 747 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 C6orf106Q9H6K1 298 aaPredicted RBP14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.66□□□□□ -0.065e-7■■■■■ 34.9
CSNK1D-211ENST00000579316 NME7Q9Y5B8 376 aa14.66□□□□□ -0.06
CSNK1D-211ENST00000579316 SYNCRIPO60506 623 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 TBCAO75347 108 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 IRF1P10914 325 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 IFRD2Q12894 506 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 ZNF720Q7Z2F6 126 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 ZSWIM2Q8NEG5 633 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 RFFLQ8WZ73 363 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 SNX19Q92543 992 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 CNDP2Q96KP4 475 aaKnown RBP14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 STRA6Q9BX79 667 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 BLOC1S4Q9NUP1 217 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 CHORDC1Q9UHD1 332 aaPredicted RBP14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 DOPEY2Q9Y3R5 2298 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 MYH10P35580 1976 aa14.65□□□□□ -0.06
CSNK1D-211ENST00000579316 SPTAN1Q13813 2472 aaKnown RBP14.64□□□□□ -0.07
CSNK1D-211ENST00000579316 SLC28A2O43868 658 aa14.64□□□□□ -0.07
CSNK1D-211ENST00000579316 TSPAN3O60637 253 aa14.64□□□□□ -0.07
CSNK1D-211ENST00000579316 TACC1O75410 805 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms