RNA–Protein interactions for RNA: ENST00000579289.1

SUPT4H1-203, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 3

Gene SUPT4H1, Length 318 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-203ENST00000579289 NRSN2Q9GZP1 204 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 GZF1Q9H116 711 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 MIR1-1HGQ9H1L0 117 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 C6orf106Q9H6K1 298 aaPredicted RBP11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 PDE11AQ9HCR9 933 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 DNAJC17Q9NVM6 304 aaKnown RBP11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 OSER1Q9NX31 292 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 ANKRD6Q9Y2G4 727 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 PCDHGA1Q9Y5H4 931 aa11.85□□□□□ -0.51
SUPT4H1-203ENST00000579289 TEX15Q9BXT5 2789 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 CLDN5O00501 218 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 ARHGAP6O43182 974 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 TBX18O95935 607 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 CST3P01034 146 aaPredicted RBP11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 GRK6P43250 576 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 CASP5P51878 434 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 RBP5P82980 135 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 CYP27A1Q02318 531 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 GRIN1Q05586 938 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 TARDBPQ13148 414 aaKnown RBP eCLIP11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 MDH1BQ5I0G3 518 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 TMEM215Q68D42 235 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 KIAA1324Q6UXG2 1013 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 SPACA3Q8IXA5 215 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 ZMIZ2Q8NF64 920 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 TTC9Q92623 222 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 HNRNPABQ99729 332 aaKnown RBP11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 FAM213AQ9BRX8 229 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 TM9SF3Q9HD45 589 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 INTS13Q9NVM9 706 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 CLEC4EQ9ULY5 219 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 SLC27A6Q9Y2P4 619 aa11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.84□□□□□ -0.51
SUPT4H1-203ENST00000579289 ARID1BQ8NFD5 2236 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 MEI4A8MW99 385 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 NEDD8-MDP1E9PL57 170 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 ERVH48-1M5A8F1 160 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 TSPAN3O60637 253 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 TACC1O75410 805 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 FAM13AO94988 1023 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 ABL1P00519 1130 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 YWHAQP27348 245 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 ACSL1P33121 698 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 ACADVLP49748 655 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 SEMG2Q02383 582 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 DNAJC3Q13217 504 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 GEN1Q17RS7 908 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 PREPLQ4J6C6 727 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 PKDCCQ504Y2 493 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 HECTD3Q5T447 861 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 FYB2Q5VWT5 728 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 TDRD10Q5VZ19 366 aaKnown RBP11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 BTBD8Q5XKL5 378 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 USP49Q70CQ1 688 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 TMPRSS6Q8IU80 811 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 NUP93Q8N1F7 819 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 POMGNT1Q8WZA1 660 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 RAD54LQ92698 747 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 IGSF8Q969P0 613 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 NXPE2Q96DL1 559 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 PIWIL1Q96J94 861 aaKnown RBP11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 CBWD1Q9BRT8 395 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 CLMPQ9H6B4 373 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 EBF2Q9HAK2 575 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 FOXD4L1Q9NU39 408 aa11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 TP53BP1Q12888 1972 aaPredicted RBP11.83□□□□□ -0.52
SUPT4H1-203ENST00000579289 A0A1B0GTQ1 180 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 VPS37CA5D8V6 355 aaPredicted RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 GOLGA8IPA6NC78 632 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 VWA3AA6NCI4 1184 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 GOLGA8JA6NMD2 632 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 B8ZZF3 427 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SLC26A4O43511 780 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 PENKP01210 267 aaPredicted RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 KLKB1P03952 638 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 PTPN1P18031 435 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 PRKCHP24723 683 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 OXTRP30559 389 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 GRIA4P48058 902 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 DGKGP49619 791 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 AFF3P51826 1226 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 MFAP3P55082 362 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SF3A1Q15459 793 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 MAPRE1Q15691 268 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SDE2Q6IQ49 451 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 TPGS1Q6ZTW0 290 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 KANSL1Q7Z3B3 1105 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SFR1Q86XK3 245 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 CACTIN-AS1Q8N1I8 211 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SAP25Q8TEE9 199 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 RFFLQ8WZ73 363 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 HVCN1Q96D96 273 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 DNAJC19Q96DA6 116 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 HPDLQ96IR7 371 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 HIC2Q96JB3 615 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 SLITRK1Q96PX8 696 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 NUP58Q9BVL2 599 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 BBS2Q9BXC9 721 aa11.82□□□□□ -0.52
SUPT4H1-203ENST00000579289 PCED1AQ9H1Q7 454 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms