RNA–Protein interactions for RNA: ENST00000578896.1

GGA3-207, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 5

Gene GGA3, Length 439 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-207ENST00000578896 TRIM61Q5EBN2 209 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 C10orf120Q5SQS8 335 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 PPP1R26Q5T8A7 1209 aaPredicted RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 SH3PXD2AQ5TCZ1 1133 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 GRAMD4Q6IC98 578 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 HTR3DQ70Z44 454 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 LPCAT2Q7L5N7 544 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 FAM186BQ8IYM0 893 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 KIAA1958Q8N8K9 716 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 TERB1Q8NA31 727 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 DEFB124Q8NES8 71 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 NDRG1Q92597 394 aaKnown RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 TAF4BQ92750 862 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 TATDN2Q93075 761 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 OTUB2Q96DC9 234 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 BBS2Q9BXC9 721 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 NT5C1AQ9BXI3 368 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 FBXO44Q9H4M3 255 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 COMMD8Q9NX08 183 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 NAGPAQ9UK23 515 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 RALYQ9UKM9 306 aaKnown RBP9.42□□□□□ -0.9
GGA3-207ENST00000578896 ANGPTL2Q9UKU9 493 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 SCML2Q9UQR0 700 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 ZFHX4Q86UP3 3567 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 PLXND1Q9Y4D7 1925 aa9.42□□□□□ -0.9
GGA3-207ENST00000578896 A0A1W2PQF6 199 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CILPO75339 1184 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 RHOBTB3O94955 611 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 KLKB1P03952 638 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CISD3P0C7P0 127 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 KRT13P13646 458 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 KIF11P52732 1056 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 KRT85P78386 507 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 ZNF252P-AS1Q0IIN9 211 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 INCA1Q0VD86 236 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 DAB2IPQ5VWQ8 1189 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 KRBA2Q6ZNG9 492 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CHPFQ8IZ52 775 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 OR2I1PQ8NGU4 316 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 ERCC4Q92889 916 aaPredicted RBP9.41□□□□□ -0.9
GGA3-207ENST00000578896 SPACA7Q96KW9 195 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 HEXIM2Q96MH2 286 aaKnown RBP9.41□□□□□ -0.9
GGA3-207ENST00000578896 ARID3AQ99856 593 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 NIF3L1Q9GZT8 377 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 TMEM9BQ9NQ34 198 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CYLDQ9NQC7 956 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 MTPAPQ9NVV4 582 aaKnown RBP eCLIP9.41□□□□□ -0.9
GGA3-207ENST00000578896 CACNA2D2Q9NY47 1150 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CALCOCO1Q9P1Z2 691 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 USP25Q9UHP3 1055 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 RASAL2Q9UJF2 1139 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 CYP8B1Q9UNU6 501 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 FAM208BQ5VWN6 2430 aa9.41□□□□□ -0.9
GGA3-207ENST00000578896 FAM237AA0A1B0GTK4 181 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 C1QTNF9BB2RNN3 333 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 TULP2O00295 520 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 STC2O76061 302 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 ZNF202O95125 648 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 CFIP05156 583 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 C1QTNF9P0C862 333 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 ENGP17813 658 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 NDUFV2P19404 249 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 NTSR1P30989 418 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 PSMC2P35998 433 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 RPL6Q02878 288 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 EFEMP1Q12805 493 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 PNOCQ13519 176 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 HSF5Q4G112 596 aaPredicted RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 LYSMD4Q5XG99 296 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 Q6ZNB5 142 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 INTS8Q75QN2 995 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 C11orf74Q86VG3 221 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 IPO4Q8TEX9 1081 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 TMEM174Q8WUU8 243 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 CCDC47Q96A33 483 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 XPO6Q96QU8 1125 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 GTPBP2Q9BX10 602 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 DUSP16Q9BY84 665 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 IMPG2Q9BZV3 1241 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 CYP3A43Q9HB55 503 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 TMEM8AQ9HCN3 771 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 DNMT3LQ9UJW3 386 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 LSM7Q9UK45 103 aaKnown RBP9.4□□□□□ -0.9
GGA3-207ENST00000578896 CLEC4EQ9ULY5 219 aa9.4□□□□□ -0.9
GGA3-207ENST00000578896 ZZEF1O43149 2961 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 IGHV1OR15-9A0A0B4J2B8 117 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 SPAARA0A1B0GVQ0 90 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 CACNG3O60359 315 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 MYL1P05976 194 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 MAOBP27338 520 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 CORO1AP31146 461 aaKnown RBP9.39□□□□□ -0.91
GGA3-207ENST00000578896 PLA2G4AP47712 749 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 DGKGP49619 791 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 RAD23BP54727 409 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 ZNF33AQ06730 810 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 LRMPQ12912 555 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 GEN1Q17RS7 908 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 ZCWPW2Q504Y3 356 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 KRT39Q6A163 491 aa9.39□□□□□ -0.91
GGA3-207ENST00000578896 KIAA1324Q6UXG2 1013 aaKnown RBP9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms