RNA–Protein interactions for RNA: ENST00000578733.5

CDK5RAP3-210, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 2

Gene CDK5RAP3, Length 578 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-210ENST00000578733 DDX42Q86XP3 938 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SHKBP1Q8TBC3 707 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CLEC4CQ8WTT0 213 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 NCAPGQ9BPX3 1015 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TSGA10Q9BZW7 698 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 THAP2Q9H0W7 228 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 KCNH6Q9H252 994 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CTTNBP2NLQ9P2B4 639 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PAXBP1Q9Y5B6 917 aa11.79□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM170AA1A519 330 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DPYSL4O14531 572 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CCP110O43303 1012 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ZSCAN12O43309 604 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 GRAP2O75791 330 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CYP1A2P05177 515 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MBL2P11226 248 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 HDCP19113 662 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MATKP42679 507 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 VAV2P52735 878 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 RNASE9P60153 205 aaKnown RBP11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 NTHL1P78549 312 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CCZ1BP86790 482 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CCZ1P86791 482 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MTA1Q13330 715 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MTF1Q14872 753 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DCAF6Q58WW2 860 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 PTCRAQ6ISU1 281 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SCD5Q86SK9 330 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DEFB106AQ8N104 65 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MAB21L3Q8N8X9 362 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FEZF2Q8TBJ5 459 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 ZNF564Q8TBZ8 553 aaPredicted RBP11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SUSD6Q92537 303 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 EDEM1Q92611 657 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 E2F7Q96AV8 911 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 MCEEQ96PE7 176 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 SLC2A13Q96QE2 648 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 NUP85Q9BW27 656 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM204AQ9H8W3 233 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 KIF9Q9HAQ2 790 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 TJP2Q9UDY2 1190 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 RASAL2Q9UJF2 1139 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 DNMT3LQ9UJW3 386 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 CDH7Q9ULB5 785 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 USTQ9Y2C2 406 aa11.78□□□□□ -0.52
CDK5RAP3-210ENST00000578733 FAM86C2PA6NEL3 165 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ATMINO43313 823 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 KRT86O43790 486 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TADA3O75528 432 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 GABBR2O75899 941 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 F9P00740 461 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 OAS1P00973 400 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ALADP13716 330 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PDGFRAP16234 1089 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 GJA1P17302 382 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CEBPBP17676 345 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 WEE1P30291 646 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CCR2P41597 374 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NOP2P46087 812 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SULT1E1P49888 294 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 COG7P83436 770 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 EFEMP1Q12805 493 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MAMLD1Q13495 774 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SLC5A9Q2M3M2 681 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 HS1BP3Q53T59 392 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TXNDC8Q6A555 127 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MSANTD2Q6P1R3 559 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 BHLHA9Q7RTU4 235 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PHLDB2Q86SQ0 1253 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TMEM150AQ86TG1 271 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NPAS3Q8IXF0 933 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CMTM8Q8IZV2 173 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PLCD3Q8N3E9 789 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TDRD5Q8NAT2 981 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ACRBPQ8NEB7 543 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ITFG1Q8TB96 612 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ING5Q8WYH8 240 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 RFFLQ8WZ73 363 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NDRG1Q92597 394 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 FGF13Q92913 245 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TCEAL4Q96EI5 215 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 PHF7Q9BWX1 381 aaPredicted RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 POMKQ9H5K3 350 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 CCSER2Q9H7U1 834 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 NMUR1Q9HB89 426 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MARCH2Q9P0N8 246 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 IP6K2Q9UHH9 426 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 SLC12A6Q9UHW9 1150 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 TMEM59LQ9UK28 342 aa11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 LSM7Q9UK45 103 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 HBS1LQ9Y450 684 aaKnown RBP11.77□□□□□ -0.53
CDK5RAP3-210ENST00000578733 KIF26AQ9ULI4 1882 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 A0A0A6YYK5 440 aaPredicted RBP11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 C2orf78A6NCI8 922 aa11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 GRXCR2A6NFK2 248 aa11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MYO1FO00160 1098 aa11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 ZNF263O14978 683 aa11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 MOSPD3O75425 235 aa11.76□□□□□ -0.53
CDK5RAP3-210ENST00000578733 RNF8O76064 485 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms