RNA–Protein interactions for RNA: ENST00000578600.1

PTPRM-208, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 2

Gene PTPRM, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-208ENST00000578600 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.23□□□□□ -1.41
PTPRM-208ENST00000578600 MAFAQ8NHW3 353 aaPredicted RBP6.23□□□□□ -1.41
PTPRM-208ENST00000578600 SOCS4Q8WXH5 440 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 TFAP2CQ92754 450 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 SCAMP4Q969E2 229 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 LRRC46Q96FV0 321 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 TEPSINQ96N21 525 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 ARHGAP39Q9C0H5 1083 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 XRN2Q9H0D6 950 aaKnown RBP eCLIP6.23□□□□□ -1.41
PTPRM-208ENST00000578600 TDRD3Q9H7E2 651 aaKnown RBP6.23□□□□□ -1.41
PTPRM-208ENST00000578600 GPR35Q9HC97 309 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 TBC1D23Q9NUY8 699 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 USP40Q9NVE5 1235 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 FBXO34Q9NWN3 711 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 LRFN1Q9P244 771 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 ANAPC4Q9UJX5 808 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 SLC45A2Q9UMX9 530 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 MAN2B2Q9Y2E5 1009 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 PCDHGB3Q9Y5G1 929 aa6.23□□□□□ -1.41
PTPRM-208ENST00000578600 POLR2AP24928 1970 aaKnown RBP6.23□□□□□ -1.41
PTPRM-208ENST00000578600 RPAP1Q9BWH6 1393 aaPredicted RBP6.22□□□□□ -1.41
PTPRM-208ENST00000578600 A0A087WWL8 130 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CDHR4A6H8M9 788 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 DBX1A6NMT0 343 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 PODXLO00592 558 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 AGFG2O95081 481 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 HSD3B1P14060 373 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 GNAT2P19087 354 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CD53P19397 219 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TXKP42681 527 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 SLC11A2P49281 568 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 UCP3P55916 312 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 FAM110CQ1W6H9 321 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 ZACNQ401N2 412 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 DCAF12L1Q5VU92 463 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 RRAGBQ5VZM2 374 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 EFCAB12Q6NXP0 572 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CATSPERGQ6ZRH7 1159 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 USP37Q86T82 979 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CERS5Q8N5B7 392 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 OR56A3Q8NH54 315 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TDRD7Q8NHU6 1098 aaKnown RBP6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TBC1D15Q8TC07 691 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 FAM151AQ8WW52 585 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 KCNC2Q96PR1 638 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 RMDN3Q96TC7 470 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 HEPHQ9BQS7 1158 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 MAGEB5Q9BZ81 275 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 IMPG2Q9BZV3 1241 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TINAGL1Q9GZM7 467 aaPredicted RBP6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TMEM39BQ9GZU3 492 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 MS4A7Q9GZW8 240 aaPredicted RBP6.22□□□□□ -1.41
PTPRM-208ENST00000578600 MAF1Q9H063 256 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CHST8Q9H2A9 424 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 TM7SF3Q9NS93 570 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 ZSCAN32Q9NX65 697 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 PLA2G3Q9NZ20 509 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 PPP4R1LQ9P1A2 415 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 FZD1Q9UP38 647 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 CLCA2Q9UQC9 943 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 MAP3K2Q9Y2U5 619 aa6.22□□□□□ -1.41
PTPRM-208ENST00000578600 RANBP2P49792 3224 aaKnown RBP6.22□□□□□ -1.41
PTPRM-208ENST00000578600 ZNF646O15015 1829 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 CLCA1A8K7I4 914 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 TMEM233B4DJY2 109 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 AREL1O15033 823 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 DNAJB5O75953 348 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 INHBBP09529 407 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 TXNP10599 105 aaKnown RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 XRCC6P12956 609 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 IDEP14735 1019 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 PDIA3P30101 505 aaKnown RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 GCKRQ14397 625 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 GRM7Q14831 915 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 WDR43Q15061 677 aaKnown RBP eCLIP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 PFKFB4Q16877 469 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 AAK1Q2M2I8 961 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 CRB2Q5IJ48 1285 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 MFSD5Q6N075 450 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 TMED8Q6PL24 325 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 Q7L0L9 218 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 ATG16L2Q8NAA4 619 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 FEZF2Q8TBJ5 459 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 TRAPPC12Q8WVT3 735 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 ZKSCAN4Q969J2 545 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 SPSB4Q96A44 273 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 TMEM176AQ96HP8 235 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 GNRHR2Q96P88 292 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 CPPED1Q9BRF8 314 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 PRDM16Q9HAZ2 1276 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 OBP2BQ9NPH6 170 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 HECAQ9UBI9 543 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 ZNF112Q9UJU3 913 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 ZMYND8Q9ULU4 1186 aaPredicted RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 LZTS1Q9Y250 596 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 LRRFIP2Q9Y608 721 aaKnown RBP6.21□□□□□ -1.42
PTPRM-208ENST00000578600 MROH5Q6ZUA9 1318 aa6.21□□□□□ -1.42
PTPRM-208ENST00000578600 COL6A3P12111 3177 aa6.2□□□□□ -1.42
PTPRM-208ENST00000578600 A0A0G2JLL6 359 aaPredicted RBP6.2□□□□□ -1.42
PTPRM-208ENST00000578600 PI4KAP2A4QPH2 592 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms