RNA–Protein interactions for RNA: ENST00000578547.1

IFT20-207, Transcript of intraflagellar transport 20, humanhuman

TSL 1 (best)

Gene IFT20, Length 962 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-207ENST00000578547 RFFLQ8WZ73 363 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 KHSRPQ92945 711 aaKnown RBP eCLIP12.69□□□□□ -0.38
IFT20-207ENST00000578547 TRIM44Q96DX7 344 aaPredicted RBP12.69□□□□□ -0.38
IFT20-207ENST00000578547 NECTIN4Q96NY8 510 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 SLC2A13Q96QE2 648 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TRIM7Q9C029 511 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 MTPAPQ9NVV4 582 aaKnown RBP eCLIP12.69□□□□□ -0.38
IFT20-207ENST00000578547 CLIC5Q9NZA1 410 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 COX16Q9P0S2 106 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 RASAL2Q9UJF2 1139 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 ANAPC7Q9UJX3 599 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 TMEM59LQ9UK28 342 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 PYCARDQ9ULZ3 195 aa12.69□□□□□ -0.38
IFT20-207ENST00000578547 EYSQ5T1H1 3165 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 TRAV19A0A0A6YYK7 116 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 TMEM110-MUSTN1A8MSY1 372 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 COCHO43405 550 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 OAS1P00973 400 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 CKMP06732 381 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 MBL2P11226 248 aaPredicted RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 PDGFRAP16234 1089 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 GPD1P21695 349 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SDC4P31431 198 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 GBP2P32456 591 aaPredicted RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 MATKP42679 507 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 NOP2P46087 812 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 SULT1E1P49888 294 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 TUBP50607 506 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 PITX1P78337 314 aaPredicted RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 KIF5AQ12840 1032 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SMAD2Q15796 467 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 CDO1Q16878 200 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 PUS10Q3MIT2 529 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 SNX30Q5VWJ9 437 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 TADA2BQ86TJ2 420 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 NPAS3Q8IXF0 933 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 RHOT2Q8IXI1 618 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SLC35G2Q8TBE7 412 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 ZNF564Q8TBZ8 553 aaPredicted RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 BTBD6Q96KE9 485 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 CFAP57Q96MR6 1250 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SLC22A12Q96S37 553 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 CYP2S1Q96SQ9 504 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 CDK5RAP1Q96SZ6 601 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 SLC46A2Q9BY10 475 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 LACRTQ9GZZ8 138 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SMG9Q9H0W8 520 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 TASP1Q9H6P5 420 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 FAM204AQ9H8W3 233 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 OSGEPQ9NPF4 335 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 OLA1Q9NTK5 396 aaKnown RBP12.68□□□□□ -0.38
IFT20-207ENST00000578547 SMPD4Q9NXE4 827 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 UVRAGQ9P2Y5 699 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 TRIM10Q9UDY6 481 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 SFMBT1Q9UHJ3 866 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 PPP2R2CQ9Y2T4 447 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 PRUNE2Q8WUY3 3088 aa12.68□□□□□ -0.38
IFT20-207ENST00000578547 MACROD2A1Z1Q3 448 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 TMEM191CA6NGB0 347 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 C2CD4BA6NLJ0 364 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 MSI1O43347 362 aaKnown RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 HMBSP08397 361 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 IRF1P10914 325 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 IL9P15248 144 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 HDCP19113 662 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 TFE3P19532 575 aaPredicted RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 PSMA2P25787 234 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DDX6P26196 483 aaKnown RBP eCLIP12.67□□□□□ -0.38
IFT20-207ENST00000578547 NOS2P35228 1153 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 ATP5C1P36542 298 aaKnown RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 AVPR1AP37288 418 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 NAP1L1P55209 391 aaKnown RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 ATP11AP98196 1134 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 OGDHQ02218 1023 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 NME3Q13232 169 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 AAK1Q2M2I8 961 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 C15orf59Q2T9L4 293 aaPredicted RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 TAC4Q86UU9 113 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DQX1Q8TE96 717 aaKnown RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 FGF13Q92913 245 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 ZSWIM3Q96MP5 696 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 MYADMQ96S97 322 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 TBCBQ99426 244 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DDX23Q9BUQ8 820 aaKnown RBP12.67□□□□□ -0.38
IFT20-207ENST00000578547 RNF38Q9H0F5 515 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 LZTFL1Q9NQ48 299 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DDIT4Q9NX09 232 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 MARCH2Q9P0N8 246 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DNMT3LQ9UJW3 386 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 STAP1Q9ULZ2 295 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 CPQQ9Y646 472 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DUSP10Q9Y6W6 482 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 DENND4AQ7Z401 1863 aa12.67□□□□□ -0.38
IFT20-207ENST00000578547 ANAPC1Q9H1A4 1944 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 SLC12A8A0AV02 714 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 M0QYT0 321 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 CCP110O43303 1012 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 BUB1O43683 1085 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 PRAMEF12O95522 483 aa12.66□□□□□ -0.38
IFT20-207ENST00000578547 DESP17661 470 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms