RNA–Protein interactions for RNA: ENST00000578093.1

PTPRM-206, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 3

Gene PTPRM, Length 464 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-206ENST00000578093 SRRM3A6NNA2 597 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 C4orf47A7E2U8 309 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 PP2D1A8MPX8 630 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 E9PMD0 336 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 H7C4K7 107 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 M0QZQ0 153 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 GFRA2O00451 464 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CDX4O14627 284 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 HIP1RO75146 1068 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CDKL5O76039 1030 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 MCF2P10911 925 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 XRCC6P12956 609 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 BCKDHBP21953 392 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 RPA1P27694 616 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 NMT1P30419 496 aaKnown RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 HOXA6P31267 233 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 AARSP49588 968 aaKnown RBP eCLIP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 GPR15P49685 360 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 YARSP54577 528 aaKnown RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 MLLT6P55198 1093 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 YWHAHQ04917 246 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 RING1Q06587 406 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ACAP1Q15027 740 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 NFKBIBQ15653 356 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ME3Q16798 604 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CCDC142Q17RM4 750 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ARHGAP29Q52LW3 1261 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TMEM196Q5HYL7 178 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ZBTB37Q5TC79 503 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CENPPQ6IPU0 288 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 MPZL3Q6UWV2 235 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CENPQQ7L2Z9 268 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 CACNA2D4Q7Z3S7 1137 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 REC114Q7Z4M0 266 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 DNAJB7Q7Z6W7 309 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TMEM150AQ86TG1 271 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 SLITRK4Q8IW52 837 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 GIMAP7Q8NHV1 300 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 BPIFB1Q8TDL5 484 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 FBLIM1Q8WUP2 373 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 GTF3C6Q969F1 213 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 PSMG2Q969U7 264 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 LOXL4Q96JB6 756 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ZC3H10Q96K80 434 aaKnown RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TPSD1Q9BZJ3 242 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TM6SF1Q9BZW5 370 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 WNT10AQ9GZT5 417 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 BHMT2Q9H2M3 363 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 EBF3Q9H4W6 596 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TPSG1Q9NRR2 321 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 VPS45Q9NRW7 570 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 TOPORSQ9NS56 1045 aaPredicted RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 SLC38A7Q9NVC3 462 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 UBP1Q9NZI7 540 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ARHGAP28Q9P2N2 729 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 STOML1Q9UBI4 398 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 ADAM30Q9UKF2 790 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 KLK13Q9UKR3 277 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 INVSQ9Y283 1065 aa4.28□□□□□ -1.72
PTPRM-206ENST00000578093 MYO18AQ92614 2054 aaKnown RBP4.28□□□□□ -1.72
PTPRM-206ENST00000578093 BSNQ9UPA5 3926 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 GON4LQ3T8J9 2241 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 ATXN2Q99700 1313 aaKnown RBP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 PCNX2A6NKB5 2137 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 TMEM131Q92545 1883 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CCDC163A0A0D9SF12 145 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 FAM95CA0A1B0GW59 222 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 TTC26A0AVF1 554 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 BCLAF3A2AJT9 711 aaKnown RBP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CCDC169A6NNP5 214 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 K7ERI5 159 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 SLC16A4O15374 487 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 GSC2O15499 205 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 FAM189A1O60320 539 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 FOXD2O60548 495 aaPredicted RBP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 REC8O95072 547 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 OAZ2O95190 189 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CAVIN2O95810 425 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 PGRP06401 933 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 H2AFB1P0C5Y9 115 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 H2AFB2P0C5Z0 115 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 OR52Z1P0C646 297 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 HNRNPLP14866 589 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 XBP1P17861 261 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 PLCG1P19174 1290 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CDC25AP30304 524 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 LRPAP1P30533 357 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 GJA4P35212 333 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CCT6AP40227 531 aaKnown RBP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 MCM2P49736 904 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 EFNA5P52803 228 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 EPHB3P54753 998 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 CREB5Q02930 508 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 MESP2Q0VG99 397 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 GPR17Q13304 367 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 NOLC1Q14978 699 aaKnown RBP eCLIP4.27□□□□□ -1.73
PTPRM-206ENST00000578093 PPP2R5AQ15172 486 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 ZNF174Q15697 407 aa4.27□□□□□ -1.73
PTPRM-206ENST00000578093 ZBTB6Q15916 424 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms