RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 ITIH3Q06033 890 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 EIF4EBP2Q13542 120 aaPredicted RBP15.93■□□□□ 0.14
SS18-206ENST00000577572 SYPL2Q5VXT5 272 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 HFE2Q6ZVN8 426 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 DNAJB7Q7Z6W7 309 aaPredicted RBP15.93■□□□□ 0.14
SS18-206ENST00000577572 MAP7D3Q8IWC1 876 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 ARFGAP1Q8N6T3 406 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 CEP112Q8N8E3 955 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 MNS1Q8NEH6 495 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 CMASQ8NFW8 434 aaPredicted RBP15.93■□□□□ 0.14
SS18-206ENST00000577572 SLC7A14Q8TBB6 771 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 MAIP1Q8WWC4 291 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 MRPL38Q96DV4 380 aaKnown RBP15.93■□□□□ 0.14
SS18-206ENST00000577572 SERPINB11Q96P15 392 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 TRPM5Q9NZQ8 1165 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 ZMYM5Q9UJ78 669 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 NAALADL1Q9UQQ1 740 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 PLXNA4Q9HCM2 1894 aa15.93■□□□□ 0.14
SS18-206ENST00000577572 CEP290O15078 2479 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 A0A1W2PQH9 124 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 M0QYT0 321 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ZMYND10O75800 440 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 SOAT2O75908 522 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 TRUB2O95900 331 aaKnown RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 IRS1P35568 1242 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 SSR1P43307 286 aaKnown RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 TAS2R40P59535 323 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ATP11AP98196 1134 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 DEUP1Q05D60 604 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 SCAPQ12770 1279 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 PPP2R5DQ14738 602 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 PDK2Q15119 407 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 C15orf59Q2T9L4 293 aaPredicted RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 ARL13BQ3SXY8 428 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ODF2Q5BJF6 829 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 BRMS1LQ5PSV4 323 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 PPM1LQ5SGD2 360 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 SDHAF4Q5VUM1 108 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ZNF572Q7Z3I7 529 aaPredicted RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 CREG2Q8IUH2 290 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 DQX1Q8TE96 717 aaKnown RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 GIPC2Q8TF65 315 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ARNTL2Q8WYA1 636 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 NDRG1Q92597 394 aaKnown RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 ALG3Q92685 438 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 KRT35Q92764 455 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 ZNF512Q96ME7 567 aaPredicted RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 MTPAPQ9NVV4 582 aaKnown RBP eCLIP15.92■□□□□ 0.14
SS18-206ENST00000577572 GMIPQ9P107 970 aa15.92■□□□□ 0.14
SS18-206ENST00000577572 RCOR3Q9P2K3 495 aaPredicted RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 PACSIN2Q9UNF0 486 aaPredicted RBP15.92■□□□□ 0.14
SS18-206ENST00000577572 MYH10P35580 1976 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 ZNF840PA6NDX5 716 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 XYLBO75191 536 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 RARGP13631 454 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 CXCR3P49682 368 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 CDR1P51861 262 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 EPHA5P54756 1037 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 PPP2R5EQ16537 467 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 DUSP6Q16828 381 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 ERMARDQ5T6L9 678 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 SEL1L2Q5TEA6 688 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 CCDC181Q5TID7 509 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 FAM71BQ8TC56 605 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 FAM204AQ9H8W3 233 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 NMUR1Q9HB89 426 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.91■□□□□ 0.14
SS18-206ENST00000577572 DDIT4Q9NX09 232 aa15.91■□□□□ 0.14
SS18-206ENST00000577572 PGRMC1O00264 195 aaKnown RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 IRAK2O43187 625 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 CDC25CP30307 473 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 HTR7P34969 479 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 MLLT1Q03111 559 aaPredicted RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 RING1Q06587 406 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 IFRD2Q12894 506 aaPredicted RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 DPYSL2Q16555 572 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 TAZQ16635 292 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 CDO1Q16878 200 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 HECTD3Q5T447 861 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 OTUD1Q5VV17 481 aaPredicted RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 CHRDL2Q6WN34 429 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 RSRC2Q7L4I2 434 aaKnown RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 SPRED2Q7Z698 418 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 GPR152Q8TDT2 470 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 COG1Q8WTW3 980 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 EDEM1Q92611 657 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 TLE6Q9H808 572 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 DZANK1Q9NVP4 752 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP15.9■□□□□ 0.14
SS18-206ENST00000577572 TLR6Q9Y2C9 796 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 HBS1LQ9Y450 684 aaKnown RBP15.9■□□□□ 0.14
SS18-206ENST00000577572 PLXNA3P51805 1871 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 CLUHO75153 1309 aa15.9■□□□□ 0.14
SS18-206ENST00000577572 CEP104O60308 925 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 TLR5O60602 858 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 RARAP10276 462 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 DDX6P26196 483 aaKnown RBP eCLIP15.89■□□□□ 0.13
SS18-206ENST00000577572 IL1R2P27930 398 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 CCR1P32246 355 aa15.89■□□□□ 0.13
SS18-206ENST00000577572 ATP5C1P36542 298 aaKnown RBP15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms