RNA–Protein interactions for RNA: ENST00000576940.1

NPLOC4-220, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 5

Gene NPLOC4, Length 216 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-220ENST00000576940 CAMK2BQ13554 666 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 FUT11Q495W5 492 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 METTL3Q86U44 580 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 ZMIZ2Q8NF64 920 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 BAHD1Q8TBE0 780 aaPredicted RBP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 TMX3Q96JJ7 454 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 DUSP9Q99956 384 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 WDR35Q9P2L0 1181 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 DKK4Q9UBT3 224 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 STK17AQ9UEE5 414 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 EIF2B4Q9UI10 523 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 NUDT5Q9UKK9 219 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 WDR3Q9UNX4 943 aaKnown RBP eCLIP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 BTBD3Q9Y2F9 522 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 SLCO1B1Q9Y6L6 691 aa10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 HELZ2Q9BYK8 2649 aaKnown RBP10.7□□□□□ -0.7
NPLOC4-220ENST00000576940 SHROOM3Q8TF72 1996 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 A0A1B0GVT2 93 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 FAM92AA1XBS5 289 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 GFRA2O00451 464 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 MDM4O15151 490 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 CLIC2O15247 247 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 BCAT2O15382 392 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 TLR5O60602 858 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 IL12RB1P42701 662 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 CSNK1EP49674 416 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 TUBP50607 506 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 TPMTP51580 245 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 ALCAMQ13740 583 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 CCDC157Q569K6 752 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 FAM35AQ86V20 835 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 TMPRSS6Q8IU80 811 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 CADM4Q8NFZ8 388 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 DCBLD2Q96PD2 775 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 SMOQ99835 787 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 OSER1Q9NX31 292 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 PPP4R2Q9NY27 417 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 MARK1Q9P0L2 795 aa10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 USP36Q9P275 1121 aaKnown RBP10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 FBXO2Q9UK22 296 aaPredicted RBP10.69□□□□□ -0.7
NPLOC4-220ENST00000576940 CABIN1Q9Y6J0 2220 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 A0A087WV48 116 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 A0A087X0B3 334 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 KIAA0391O15091 583 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 AP1G2O75843 785 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CD2BP2O95400 341 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CER1O95813 267 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 ZNF883P0CG24 379 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 ITPKBP27987 946 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 ATP5C1P36542 298 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 MAP3K7CLP57077 242 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CEBPZQ03701 1054 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 ORC1Q13415 861 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 TRPC3Q13507 836 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SNRNP35Q16560 246 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 GEN1Q17RS7 908 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 KIF19Q2TAC6 998 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 IL27RAQ6UWB1 636 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 FAM124AQ86V42 546 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CACUL1Q86Y37 369 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SCUBE3Q8IX30 993 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 FUKQ8N0W3 1084 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 C1orf216Q8TAB5 229 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 PIP4K2CQ8TBX8 421 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SIPA1Q96FS4 1042 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CGRRF1Q99675 332 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 CDC6Q99741 560 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 GZF1Q9H116 711 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SDCBP2Q9H190 292 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 XYLT2Q9H1B5 865 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SMYD3Q9H7B4 428 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 DMAP1Q9NPF5 467 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 COMMD8Q9NX08 183 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 THAP10Q9P2Z0 257 aaPredicted RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 FBXO10Q9UK96 956 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SMC3Q9UQE7 1217 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 NFE2L3Q9Y4A8 694 aa10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 SRPRBQ9Y5M8 271 aaKnown RBP10.68□□□□□ -0.7
NPLOC4-220ENST00000576940 FLRT2O43155 660 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 TGFB1I1O43294 461 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 CCDC130P13994 396 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 ACO1P21399 889 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 OXTRP30559 389 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 STAT6P42226 847 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 CASP4P49662 377 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 COPAP53621 1224 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 MFAP3P55082 362 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 C19orf57Q0VDD7 668 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 STARD3Q14849 445 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 PSMD6Q15008 389 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 SUZ12Q15022 739 aaKnown RBP10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 FAM173BQ6P4H8 233 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 DHRS13Q6UX07 377 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 CCDC73Q6ZRK6 1079 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 BRAPQ7Z569 592 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 ACOT1Q86TX2 421 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 CCDC65Q8IXS2 484 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 GALNT15Q8N3T1 639 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 PDILTQ8N807 584 aa10.67□□□□□ -0.7
NPLOC4-220ENST00000576940 SLC2A14Q8TDB8 520 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms