RNA–Protein interactions for RNA: ENST00000576334.1

LITAF-219, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-219ENST00000576334 CLEC4CQ8WTT0 213 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 RLN3Q8WXF3 142 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 EDEM1Q92611 657 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 ACDQ96AP0 544 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 OTUB2Q96DC9 234 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 FAXDC2Q96IV6 333 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 KREMEN1Q96MU8 473 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 ACOX2Q99424 681 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 BBS2Q9BXC9 721 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 METTL14Q9HCE5 456 aaKnown RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 SEMA4GQ9NTN9 838 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 DNMT3LQ9UJW3 386 aa12.49□□□□□ -0.41
LITAF-219ENST00000576334 CIZ1Q9ULV3 898 aaPredicted RBP12.49□□□□□ -0.41
LITAF-219ENST00000576334 A0A0A0MRY4 1105 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 MED19A0JLT2 244 aaPredicted RBP12.48□□□□□ -0.41
LITAF-219ENST00000576334 TBC1D3BA6NDS4 549 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 YJEFN3A6XGL0 299 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 PRRT4C9JH25 899 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 E7ENQ6 273 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 ZBED1O96006 694 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 VDRP11473 427 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 LCP1P13796 627 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 BCKDHBP21953 392 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 EIF2DP41214 584 aaKnown RBP12.48□□□□□ -0.41
LITAF-219ENST00000576334 GRIA2P42262 883 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 PLA2G4AP47712 749 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 UBE2HP62256 183 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 PLK5Q496M5 336 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 PKDCCQ504Y2 493 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 C10orf76Q5T2E6 689 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 BTBD8Q5XKL5 378 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 GJB7Q6PEY0 223 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 CREBRFQ8IUR6 639 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 KIAA1958Q8N8K9 716 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 SECISBP2LQ93073 1101 aaKnown RBP12.48□□□□□ -0.41
LITAF-219ENST00000576334 EXOC4Q96A65 974 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 NT5C1BQ96P26 610 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 CRACR2AQ9BSW2 395 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 DUSP15Q9H1R2 295 aaPredicted RBP12.48□□□□□ -0.41
LITAF-219ENST00000576334 ACP6Q9NPH0 428 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 DNAJC17Q9NVM6 304 aaKnown RBP12.48□□□□□ -0.41
LITAF-219ENST00000576334 DLL3Q9NYJ7 618 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 KIAA1468Q9P260 1216 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 DEC1Q9P2X7 70 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 SFMBT1Q9UHJ3 866 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 CLEC4EQ9ULY5 219 aa12.48□□□□□ -0.41
LITAF-219ENST00000576334 THADAQ6YHU6 1953 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 CACNA1AO00555 2505 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 CCDC163A0A0D9SF12 145 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 SLC12A8A0AV02 714 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 BICDL2A1A5D9 508 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 DCDC2BA2VCK2 349 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 XPO1O14980 1071 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 RALAP11233 206 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 CORO1AP31146 461 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 ATXN1P54253 815 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 BCAT1P54687 386 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 MRPS21P82921 87 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 BST2Q10589 180 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 EGFLAMQ63HQ2 1017 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 PM20D1Q6GTS8 502 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 TCEAL6Q6IPX3 200 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 PMF1Q6P1K2 205 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 KLHDC10Q6PID8 442 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 PRR23CQ6ZRP0 262 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 CACNA2D4Q7Z3S7 1137 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 RASSF3Q86WH2 238 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 DENND1CQ8IV53 801 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 TTC39CQ8N584 583 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 TERB1Q8NA31 727 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 RBBP8NLQ8NC74 664 aaPredicted RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 EHBP1Q8NDI1 1231 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 TCEAL3Q969E4 200 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 GTPBP4Q9BZE4 634 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 UBXN6Q9BZV1 441 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 INTS2Q9H0H0 1204 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 CLIC5Q9NZA1 410 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 CHMP5Q9NZZ3 219 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 MARCH2Q9P0N8 246 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 HESX1Q9UBX0 185 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 EBF1Q9UH73 591 aa12.47□□□□□ -0.41
LITAF-219ENST00000576334 LSM7Q9UK45 103 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 AGO1Q9UL18 857 aaKnown RBP12.47□□□□□ -0.41
LITAF-219ENST00000576334 WASH3PC4AMC7 463 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 M0QYV0 167 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 PMM2O15305 246 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 MSI1O43347 362 aaKnown RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 CACNG3O60359 315 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 AFPP02771 609 aaKnown RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 CISD3P0C7P0 127 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 TBXAS1P24557 533 aaPredicted RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 GBP1P32455 592 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 PPP1R2P41236 205 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 TNFRSF4P43489 277 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 PSEN1P49768 467 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 MARSP56192 900 aaKnown RBP12.46□□□□□ -0.41
LITAF-219ENST00000576334 CSRP2Q16527 193 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 HSP90AA4PQ58FG1 418 aa12.46□□□□□ -0.41
LITAF-219ENST00000576334 GRAMD4Q6IC98 578 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms