RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 MMP10P09238 476 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 SPATA31C1P0DKV0 1188 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 TSHRP16473 764 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP3A7P24462 503 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 FOXN2P32314 431 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 JAM2P57087 298 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 DGKDQ16760 1214 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 TBCELQ5QJ74 424 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 LRRC38Q5VT99 294 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 LPCAT4Q643R3 524 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 NAPEPLDQ6IQ20 393 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ULK4Q96C45 1275 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 RPAP3Q9H6T3 665 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CLOCKO15516 846 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZMPSTE24O75844 475 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 IL18RAPO95256 599 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ITGAVP06756 1048 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC159P0C7I6 412 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 AVPR1AP37288 418 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 MMP14P50281 582 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 MPP3Q13368 585 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 GOLGA7BQ2TAP0 167 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ANO7Q6IWH7 933 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC60Q8IWA6 550 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 EFCAB3Q8N7B9 438 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 FAM172AQ8WUF8 416 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 PDCD6IPQ8WUM4 868 aaKnown RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZNF333Q96JL9 665 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 SEMA6AQ9H2E6 1030 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 OGTO15294 1046 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 APBA3O96018 575 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 NFKBIAP25963 317 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 TAS2R40P59535 323 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ACAP1Q15027 740 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ATF7IP2Q5U623 682 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 BHLHE22Q8NFJ8 381 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ACER1Q8TDN7 264 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 LRRC39Q96DD0 335 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 SARS2Q9NP81 518 aaKnown RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 SCN3BQ9NY72 215 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 NCKIPSDQ9NZQ3 722 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 DAPK2Q9UIK4 370 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 C15orf38-AP3S2A0A0A6YYH1 394 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAGEC1O60732 1142 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 SUPT7LO94864 414 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CDH2P19022 906 aaPredicted RBP13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 HADHAP40939 763 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 KRT72Q14CN4 511 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 RBBP7Q16576 425 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 GLRA4Q5JXX5 417 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 POLNQ7Z5Q5 900 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 ARPINQ7Z6K5 226 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 KLHL23Q8NBE8 558 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 CLPTM1LQ96KA5 538 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 TNIP3Q96KP6 325 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 IKZF4Q9H2S9 585 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 PLGRKTQ9HBL7 147 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 GPAMQ9HCL2 828 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 AP4B1Q9Y6B7 739 aa13.51□□□□□ -0.25
PCDHGB3-201ENST00000576222 KANSL1LA0AUZ9 987 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 KPNA4O00629 521 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 FASP25445 335 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 SOX10P56693 466 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 LPAR1Q92633 364 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 HPDLQ96IR7 371 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 RUBCNLQ9H714 662 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 S100A14Q9HCY8 104 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 NKX1-2Q9UD57 310 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 MAGEB2O15479 319 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 MTSS1O43312 755 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ASMTLO95671 621 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ADRB2P07550 413 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 KDELR1P24390 212 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 WASHC5Q12768 1159 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 NEDD8Q15843 81 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 KYAT1Q16773 422 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 DCAF6Q58WW2 860 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ANGPTL8Q6UXH0 198 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 CYP2R1Q6VVX0 501 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ARCQ7LC44 396 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 MECRQ9BV79 373 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 BRD8Q9H0E9 1235 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 C6orf203Q9P0P8 240 aaPredicted RBP13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 USP20Q9Y2K6 914 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ACOT9Q9Y305 439 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 C2orf71A6NGG8 1288 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 UBDO15205 165 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 PDGFRBP09619 1106 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 COX4I1P13073 169 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 BAG6P46379 1132 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCNA1P78396 465 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 SFSWAPQ12872 951 aaKnown RBP13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ACSBG2Q5FVE4 666 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 SPDYAQ5MJ70 313 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 EMC10Q5UCC4 262 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 RFWD3Q6PCD5 774 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 CCDC81Q6ZN84 652 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 RINLQ6ZS11 566 aa13.5□□□□□ -0.25
PCDHGB3-201ENST00000576222 ZNF513Q8N8E2 541 aaPredicted RBP13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms