RNA–Protein interactions for RNA: ENST00000575976.1

NUP88-211, Transcript of nucleoporin 88, humanhuman

TSL 2

Gene NUP88, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-211ENST00000575976 SLC7A9P82251 487 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ZXDBP98169 803 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 EFEMP1Q12805 493 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 MTF1Q14872 753 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 C10orf120Q5SQS8 335 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 TANGO2Q6ICL3 276 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 RAD9BQ6WBX8 426 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 BEND5Q7L4P6 421 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 CCDC170Q8IYT3 715 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ZDHHC14Q8IZN3 488 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 PLCD3Q8N3E9 789 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ZNF276Q8N554 614 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 JOSD2Q8TAC2 188 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 RNF139Q8WU17 664 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 SMARCD2Q92925 531 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 USP13Q92995 863 aaPredicted RBP8.96□□□□□ -0.98
NUP88-211ENST00000575976 PDLIM2Q96JY6 352 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ASB16Q96NS5 453 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 SLC2A13Q96QE2 648 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 SELENOOQ9BVL4 669 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 PACSIN1Q9BY11 444 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 POPDC2Q9HBU9 364 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 METTL5Q9NRN9 209 aaKnown RBP8.96□□□□□ -0.98
NUP88-211ENST00000575976 GKN1Q9NS71 199 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 SMPD4Q9NXE4 827 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 EPS15L1Q9UBC2 864 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 MYO1AQ9UBC5 1043 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 CNOT8Q9UFF9 292 aaKnown RBP8.96□□□□□ -0.98
NUP88-211ENST00000575976 SFMBT1Q9UHJ3 866 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ZMYM5Q9UJ78 669 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 RASAL2Q9UJF2 1139 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 TMEM59LQ9UK28 342 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 NR2E1Q9Y466 385 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 CPQQ9Y646 472 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 ZFP37Q9Y6Q3 630 aaPredicted RBP8.96□□□□□ -0.98
NUP88-211ENST00000575976 DENND4AQ7Z401 1863 aa8.96□□□□□ -0.98
NUP88-211ENST00000575976 SIGLEC16A6NMB1 481 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 CAPN9O14815 690 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ATMINO43313 823 aaPredicted RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 HSF2BPO75031 334 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 DAB1O75553 588 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 LCA5LO95447 670 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 PRAMEF12O95522 483 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 H2AFZP0C0S5 128 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 KRT3P12035 628 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 FCARP24071 287 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 WEE1P30291 646 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 NOS2P35228 1153 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 FLT3P36888 993 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 AVPR1AP37288 418 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 VIPR2P41587 438 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 PITX1P78337 314 aaPredicted RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 ZP2Q05996 745 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 DCAF6Q58WW2 860 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 PLEKHA7Q6IQ23 1121 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 TRNP1Q6NT89 227 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 MSANTD2Q6P1R3 559 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 DNAJC24Q6P3W2 148 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 KLHDC10Q6PID8 442 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 PARM1Q6UWI2 310 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 H2AFVQ71UI9 128 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 RSRC2Q7L4I2 434 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 TADA2BQ86TJ2 420 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 LRRC8AQ8IWT6 810 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ADHFE1Q8IWW8 467 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 GJD3Q8N144 294 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 EMC1Q8N766 993 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 C3orf20Q8ND61 904 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 RIN3Q8TB24 985 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 DQX1Q8TE96 717 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 RSAD2Q8WXG1 361 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 FGF14Q92915 247 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 WBP2Q969T9 261 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ZNF653Q96CK0 615 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ARHGEF26Q96DR7 871 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 RSPRY1Q96DX4 576 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ZFRQ96KR1 1074 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 LRRC3BQ96PB8 259 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 CDK5RAP1Q96SZ6 601 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 RPP25Q9BUL9 199 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 TRIM62Q9BVG3 475 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 KLF16Q9BXK1 252 aaPredicted RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 PLA2G2FQ9BZM2 168 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 NACA2Q9H009 215 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 THAP2Q9H0W7 228 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 TRPV4Q9HBA0 871 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ZFP14Q9HCL3 533 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 OLA1Q9NTK5 396 aaKnown RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 TDP1Q9NUW8 608 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP8.95□□□□□ -0.98
NUP88-211ENST00000575976 MARCH2Q9P0N8 246 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 PRKAG3Q9UGI9 489 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 LIMD1Q9UGP4 676 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 DNMT3LQ9UJW3 386 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 ARHGAP26Q9UNA1 814 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 CCL26Q9Y258 94 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 EPN1Q9Y6I3 576 aaPredicted RBP8.95□□□□□ -0.98
NUP88-211ENST00000575976 BRWD1Q9NSI6 2320 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 OBSL1O75147 1896 aa8.95□□□□□ -0.98
NUP88-211ENST00000575976 MYO16Q9Y6X6 1858 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms