RNA–Protein interactions for RNA: ENST00000575830.2

CDC27-218, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 397 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-218ENST00000575830 CCDC138Q96M89 665 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 ASB2Q96Q27 587 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 FYTTD1Q96QD9 318 aaKnown RBP3.87□□□□□ -1.79
CDC27-218ENST00000575830 MMS19Q96T76 1030 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 MYD88Q99836 296 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 GATA5Q9BWX5 397 aaPredicted RBP3.87□□□□□ -1.79
CDC27-218ENST00000575830 STK33Q9BYT3 514 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 SNX15Q9NRS6 342 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 VPS45Q9NRW7 570 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 ADARB2Q9NS39 739 aaKnown RBP3.87□□□□□ -1.79
CDC27-218ENST00000575830 LPAR3Q9UBY5 353 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 CA14Q9ULX7 337 aa3.87□□□□□ -1.79
CDC27-218ENST00000575830 CYP2D7A0A087X1C5 515 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 GXYLT2A0PJZ3 443 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 CES2O00748 559 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 COQ9O75208 318 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 NDST3O95803 873 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 CYP2A6P11509 494 aaPredicted RBP3.86□□□□□ -1.79
CDC27-218ENST00000575830 CERS1P27544 350 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 HSPA7P48741 367 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 MTHFSP49914 203 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 MRPS21P82921 87 aaKnown RBP3.86□□□□□ -1.79
CDC27-218ENST00000575830 DAZAP2Q15038 168 aaPredicted RBP3.86□□□□□ -1.79
CDC27-218ENST00000575830 FAM187BQ17R55 369 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 TMTC4Q5T4D3 741 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 GALNT16Q8N428 558 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 CCDC33Q8N5R6 958 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 PARD3BQ8TEW8 1205 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 ABHD5Q8WTS1 349 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 OVCA2Q8WZ82 227 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 C1QTNF7Q9BXJ2 289 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 PCDHAC1Q9H158 963 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 TMOD4Q9NZQ9 345 aa3.86□□□□□ -1.79
CDC27-218ENST00000575830 FAM234BA2RU67 622 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 EXOC3O60645 756 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 NTSR2O95665 410 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 MYL3P08590 195 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 NBPF7P0C2Y1 421 aaPredicted RBP3.85□□□□□ -1.79
CDC27-218ENST00000575830 TMEM225BP0DP42 221 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 SFPQP23246 707 aaKnown RBP eCLIP3.85□□□□□ -1.79
CDC27-218ENST00000575830 THBS4P35443 961 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 PBX1P40424 430 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 DGKQP52824 942 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 TRIM71Q2Q1W2 868 aaKnown RBP3.85□□□□□ -1.79
CDC27-218ENST00000575830 UBE2Q1Q7Z7E8 422 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 NEK8Q86SG6 692 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 KIAA1191Q96A73 305 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 LRRC46Q96FV0 321 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 PRR11Q96HE9 360 aaPredicted RBP3.85□□□□□ -1.79
CDC27-218ENST00000575830 ELAC2Q9BQ52 826 aaKnown RBP3.85□□□□□ -1.79
CDC27-218ENST00000575830 PAAF1Q9BRP4 392 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 SAP30LQ9HAJ7 183 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 TFCP2L1Q9NZI6 479 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 CCNL1Q9UK58 526 aaPredicted RBP3.85□□□□□ -1.79
CDC27-218ENST00000575830 BTBD3Q9Y2F9 522 aa3.85□□□□□ -1.79
CDC27-218ENST00000575830 UBE2Q2LH0YL09 131 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 PPP6CO00743 305 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 CCNT2O60583 730 aaKnown RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 PRAMEF2O60811 474 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 BCAR3O75815 825 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 USP1O94782 785 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 GLP2RO95838 553 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 PECAM1P16284 738 aaPredicted RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 SERPINB3P29508 390 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 COPB1P53618 953 aaKnown RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 BTKQ06187 659 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 SRSF4Q08170 494 aaKnown RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 NSUN2Q08J23 767 aaKnown RBP eCLIP3.84□□□□□ -1.79
CDC27-218ENST00000575830 GPS1Q13098 491 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 GRM1Q13255 1194 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 UBE4AQ14139 1066 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 RAB30Q15771 203 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 CEP78Q5JTW2 689 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 ARL6IP4Q66PJ3 421 aaKnown RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 PIK3AP1Q6ZUJ8 805 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 SRLQ86TD4 932 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 FAM186BQ8IYM0 893 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 MAFAQ8NHW3 353 aaPredicted RBP3.84□□□□□ -1.79
CDC27-218ENST00000575830 TMEM41AQ96HV5 264 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 CCDC17Q96LX7 622 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 TTLL2Q9BWV7 592 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 KCNK9Q9NPC2 374 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 NLRC4Q9NPP4 1024 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 ZNF804BA4D1E1 1349 aa3.84□□□□□ -1.79
CDC27-218ENST00000575830 CCDC194A0A1B0GVG4 234 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 DNAJC9-AS1A6NH13 148 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 C16orf96A6NNT2 1141 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 SMIM22K7EJ46 135 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 FCHO1O14526 889 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 CTIFO43310 598 aaKnown RBP3.83□□□□□ -1.8
CDC27-218ENST00000575830 TMIGD3P0DMS9 266 aaPredicted RBP3.83□□□□□ -1.8
CDC27-218ENST00000575830 IDEP14735 1019 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 DUSP1P28562 367 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 IL6STP40189 918 aaPredicted RBP3.83□□□□□ -1.8
CDC27-218ENST00000575830 SEC23BQ15437 767 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 C11orf87Q6NUJ2 197 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 TXLNBQ8N3L3 684 aa3.83□□□□□ -1.8
CDC27-218ENST00000575830 FSTL5Q8N475 847 aaPredicted RBP3.83□□□□□ -1.8
CDC27-218ENST00000575830 PNLDC1Q8NA58 520 aaKnown RBP3.83□□□□□ -1.8
CDC27-218ENST00000575830 CCDC150Q8NCX0 1101 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms