RNA–Protein interactions for RNA: ENST00000575783.5

CTDNEP1-211, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 5

Gene CTDNEP1, Length 876 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-211ENST00000575783 CISD3P0C7P0 127 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 ACADMP11310 421 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 JUPP14923 745 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 GRK6P43250 576 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 AFF3P51826 1226 aaKnown RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 SF3A1Q15459 793 aaKnown RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 DUOXA2Q1HG44 320 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 HTR3DQ70Z44 454 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 FAM124AQ86V42 546 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 TMPRSS12Q86WS5 348 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 CACUL1Q86Y37 369 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 LSM14AQ8ND56 463 aaKnown RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 ENGASEQ8NFI3 743 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 ZSCAN31Q96LW9 406 aaPredicted RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 DUSP9Q99956 384 aaKnown RBP17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 NUP58Q9BVL2 599 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 PLK2Q9NYY3 685 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 AK5Q9Y6K8 562 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 SLCO1B1Q9Y6L6 691 aa17.23■□□□□ 0.35
CTDNEP1-211ENST00000575783 A8MXQ7 604 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 TLX3O43711 291 aaPredicted RBP17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 SYNCRIPO60506 623 aaKnown RBP17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 PRPF6O94906 941 aaKnown RBP17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 TBX18O95935 607 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 TUBP50607 506 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 CLDN6P56747 220 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 SNX30Q5VWJ9 437 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 C1orf216Q8TAB5 229 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 PRCCQ92733 491 aaPredicted RBP17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 NXPE2Q96DL1 559 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 MED10Q9BTT4 135 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 ANKRD6Q9Y2G4 727 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 PCDHB13Q9Y5F0 798 aa17.22■□□□□ 0.35
CTDNEP1-211ENST00000575783 GREM1O60565 184 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 TLR5O60602 858 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 TACC1O75410 805 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 IL12RB1P42701 662 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 PGFP49763 221 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 CASP5P51878 434 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 SLC5A3P53794 718 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 IL9RQ01113 521 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 CFHR1Q03591 330 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 GRIN1Q05586 938 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 TEAD4Q15561 434 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 C6orf118Q5T5N4 469 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 GPD1LQ8N335 351 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 B3GALNT2Q8NCR0 500 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 MARK1Q9P0L2 795 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 FTSJ1Q9UET6 329 aa17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 LSM7Q9UK45 103 aaKnown RBP17.21■□□□□ 0.35
CTDNEP1-211ENST00000575783 ATMQ13315 3056 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 CST3P01034 146 aaPredicted RBP17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 ZDHHC11BP0C7U3 371 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 TNNC1P63316 161 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 WDR72Q3MJ13 1102 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 TRAPPC11Q7Z392 1133 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 GPR155Q7Z3F1 870 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 KLF16Q9BXK1 252 aaPredicted RBP17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 SEL1LQ9UBV2 794 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 MGAQ8IWI9 3026 aa17.2■□□□□ 0.34
CTDNEP1-211ENST00000575783 SHROOM3Q8TF72 1996 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 ZNF233A6NK53 670 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 H0Y8X5 98 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 GAP43P17677 238 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 HNF1BP35680 557 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 LONP1P36776 959 aaKnown RBP17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 CCT8P50990 548 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 CDH8P55286 799 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 SURF1Q15526 300 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 LAYNQ6UX15 382 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 CBWD2Q8IUF1 395 aa17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 C6orf106Q9H6K1 298 aaPredicted RBP17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 THAP10Q9P2Z0 257 aaPredicted RBP17.19■□□□□ 0.34
CTDNEP1-211ENST00000575783 PCDHGA12O60330 932 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 IDEP14735 1019 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 ZNF132P52740 706 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 GOLGA8FQ08AF8 430 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 GOLGA8DPQ0D2H9 430 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 TARDBPQ13148 414 aaKnown RBP eCLIP17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 BAP1Q92560 729 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 IGSF8Q969P0 613 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 FGFBP2Q9BYJ0 223 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 TM9SF3Q9HD45 589 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 DMAP1Q9NPF5 467 aaPredicted RBP17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 IL37Q9NZH6 218 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 NXF1Q9UBU9 619 aaKnown RBP17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 HECTD1Q9ULT8 2610 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 ATP8B3O60423 1300 aa17.18■□□□□ 0.34
CTDNEP1-211ENST00000575783 TEX51A0A1B0GUA7 166 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 IGLV3-19P01714 112 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 FAM163BP0C2L3 166 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 DLATP10515 647 aaKnown RBP17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 ACO1P21399 889 aaKnown RBP17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 ATP5C1P36542 298 aaKnown RBP17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 COPAP53621 1224 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 GEN1Q17RS7 908 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 INAVAQ3KP66 663 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 KCNT1Q5JUK3 1230 aa17.17■□□□□ 0.34
CTDNEP1-211ENST00000575783 PAQR9Q6ZVX9 377 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms