RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 SLC47A2Q86VL8 602 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 C1orf210Q8IVY1 113 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 FAM114A1Q8IWE2 563 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 YAF2Q8IY57 180 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 AOPEPQ8N6M6 819 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 EPS8L1Q8TE68 723 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 CPXM1Q96SM3 734 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 SYT11Q9BT88 431 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 CD248Q9HCU0 757 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 CNGB3Q9NQW8 809 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 POLR3BQ9NW08 1133 aaPredicted RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 ANO10Q9NW15 660 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 MARK1Q9P0L2 795 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 NOCTQ9UK39 431 aaKnown RBP9.11□□□□□ -0.95
SMG6-216ENST00000575176 DNAJC12Q9UKB3 198 aa9.11□□□□□ -0.95
SMG6-216ENST00000575176 NUP205Q92621 2012 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 TP53BP1Q12888 1972 aaPredicted RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 E5RJQ4 531 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 GOLGA6L22H0YM25 854 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 K7EQS6 105 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 PIK3R2O00459 728 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 TRIM24O15164 1050 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 MSI1O43347 362 aaKnown RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 SP9P0CG40 484 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 PRKCSHP14314 528 aaPredicted RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 HNRNPLP14866 589 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG6-216ENST00000575176 PSEN1P49768 467 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 COPB1P53618 953 aaKnown RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 SATB1Q01826 763 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 CETN1Q12798 172 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 STILQ15468 1287 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 TRIP4Q15650 581 aaPredicted RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 ARHGAP44Q17R89 818 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 PTPN20Q4JDL3 420 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 LY6G5CQ5SRR4 150 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 TRNP1Q6NT89 227 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 OLFML1Q6UWY5 402 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 TMEM110Q86TL2 294 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 NOP9Q86U38 636 aaKnown RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 DDX42Q86XP3 938 aaKnown RBP eCLIP9.1□□□□□ -0.95
SMG6-216ENST00000575176 ZBTB44Q8NCP5 570 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 CSGALNACT1Q8TDX6 532 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 STK32AQ8WU08 396 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 MYEOVQ96EZ4 313 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 HSFY1Q96LI6 401 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 ERGIC2Q96RQ1 377 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 PRRX2Q99811 253 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 IER2Q9BTL4 223 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 LSM14BQ9BX40 385 aaKnown RBP9.1□□□□□ -0.95
SMG6-216ENST00000575176 TTYH3Q9C0H2 523 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 STOML2Q9UJZ1 356 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 NAGPAQ9UK23 515 aa9.1□□□□□ -0.95
SMG6-216ENST00000575176 A0A0A0MRY4 1105 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 CHURC1-FNTBB4DL54 471 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 I6L893 689 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 CACNG3O60359 315 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 LETM1O95202 739 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 NFATC1O95644 943 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 ABL1P00519 1130 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 PENKP01210 267 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 ERBB2P04626 1255 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 IRF1P10914 325 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 CHRNB2P17787 502 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 RFX1P22670 979 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 EIF2DP41214 584 aaKnown RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 KIR2DL1P43626 348 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 SLC6A11P48066 632 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 IFNAR2P48551 515 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 GALK1P51570 392 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 SGSHP51688 502 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 KPNA1P52294 538 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 MFAP3P55082 362 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 DRAP1Q14919 205 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 TAF5Q15542 800 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 ZNF528Q3MIS6 628 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 FYB2Q5VWT5 728 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 BSPRYQ5W0U4 402 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 C1orf228Q6PIY5 440 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 TSSK4Q6SA08 328 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 ASCL5Q7RTU5 278 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 BNIPLQ7Z465 357 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 MIB1Q86YT6 1006 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 CPA6Q8N4T0 437 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 C1orf131Q8NDD1 294 aaKnown RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 SLC20A1Q8WUM9 679 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 IRGQQ8WZA9 623 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 EDEM1Q92611 657 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 OTUB2Q96DC9 234 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 SLC39A13Q96H72 371 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 FCRL2Q96LA5 508 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 PRICKLE1Q96MT3 831 aaPredicted RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 NELL2Q99435 816 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 VPS16Q9H269 839 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 LMAN1LQ9HAT1 526 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 THG1LQ9NWX6 298 aaKnown RBP9.09□□□□□ -0.95
SMG6-216ENST00000575176 HESX1Q9UBX0 185 aa9.09□□□□□ -0.95
SMG6-216ENST00000575176 DNMT3LQ9UJW3 386 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms