RNA–Protein interactions for RNA: ENST00000574872.1

PFN1-203, Transcript of profilin 1, humanhuman

TSL 2 BASIC

Gene PFN1, Length 1,173 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFN1-203ENST00000574872 SLC6A3Q01959 620 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 TSR1Q2NL82 804 aaKnown RBP17.01■□□□□ 0.31
PFN1-203ENST00000574872 FAM102AQ5T9C2 384 aaPredicted RBP17.01■□□□□ 0.31
PFN1-203ENST00000574872 KLHDC10Q6PID8 442 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 CNGA4Q8IV77 575 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 ASIC4Q96FT7 647 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 KLF16Q9BXK1 252 aaPredicted RBP17.01■□□□□ 0.31
PFN1-203ENST00000574872 BRD9Q9H8M2 597 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 ZNHIT6Q9NWK9 470 aaKnown RBP17.01■□□□□ 0.31
PFN1-203ENST00000574872 ADAM22Q9P0K1 906 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 BZW2Q9Y6E2 419 aaKnown RBP17.01■□□□□ 0.31
PFN1-203ENST00000574872 WNT6Q9Y6F9 365 aa17.01■□□□□ 0.31
PFN1-203ENST00000574872 HELZP42694 1942 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 SLC12A8A0AV02 714 aa17■□□□□ 0.31
PFN1-203ENST00000574872 TNFRSF10AO00220 468 aa17■□□□□ 0.31
PFN1-203ENST00000574872 ZNF263O14978 683 aa17■□□□□ 0.31
PFN1-203ENST00000574872 DCXO43602 365 aa17■□□□□ 0.31
PFN1-203ENST00000574872 HSF2BPO75031 334 aa17■□□□□ 0.31
PFN1-203ENST00000574872 SRFP11831 508 aa17■□□□□ 0.31
PFN1-203ENST00000574872 HNRNPH3P31942 346 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 RNASE9P60153 205 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 YWHAZP63104 245 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 FCHO2Q0JRZ9 810 aa17■□□□□ 0.31
PFN1-203ENST00000574872 EFHC1Q5JVL4 640 aa17■□□□□ 0.31
PFN1-203ENST00000574872 SYPL2Q5VXT5 272 aa17■□□□□ 0.31
PFN1-203ENST00000574872 TRIM68Q6AZZ1 485 aa17■□□□□ 0.31
PFN1-203ENST00000574872 ACAD10Q6JQN1 1059 aa17■□□□□ 0.31
PFN1-203ENST00000574872 CC2D1AQ6P1N0 951 aaPredicted RBP17■□□□□ 0.31
PFN1-203ENST00000574872 WDR59Q6PJI9 974 aa17■□□□□ 0.31
PFN1-203ENST00000574872 MON1BQ7L1V2 547 aa17■□□□□ 0.31
PFN1-203ENST00000574872 DDX42Q86XP3 938 aaKnown RBP eCLIP17■□□□□ 0.31
PFN1-203ENST00000574872 PHF13Q86YI8 300 aaPredicted RBP17■□□□□ 0.31
PFN1-203ENST00000574872 ZDHHC17Q8IUH5 632 aa17■□□□□ 0.31
PFN1-203ENST00000574872 DEFB106AQ8N104 65 aa17■□□□□ 0.31
PFN1-203ENST00000574872 ZNF276Q8N554 614 aa17■□□□□ 0.31
PFN1-203ENST00000574872 SPC24Q8NBT2 197 aa17■□□□□ 0.31
PFN1-203ENST00000574872 ADAM32Q8TC27 787 aa17■□□□□ 0.31
PFN1-203ENST00000574872 DQX1Q8TE96 717 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 POPDC2Q9HBU9 364 aa17■□□□□ 0.31
PFN1-203ENST00000574872 OLA1Q9NTK5 396 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 THG1LQ9NWX6 298 aaKnown RBP17■□□□□ 0.31
PFN1-203ENST00000574872 ADAMTS1Q9UHI8 967 aa17■□□□□ 0.31
PFN1-203ENST00000574872 STRIP2Q9ULQ0 834 aa17■□□□□ 0.31
PFN1-203ENST00000574872 SH3BP1Q9Y3L3 701 aa17■□□□□ 0.31
PFN1-203ENST00000574872 GJB6O95452 261 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 EIF4A3P38919 411 aaKnown RBP16.99■□□□□ 0.31
PFN1-203ENST00000574872 ZXDAP98168 799 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 TNK2Q07912 1038 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 PTP4A2Q12974 167 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 DCAF6Q58WW2 860 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 SLC26A9Q7LBE3 791 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 VPS36Q86VN1 386 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 TTC8Q8TAM2 541 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 TRIM62Q9BVG3 475 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 METTL5Q9NRN9 209 aaKnown RBP16.99■□□□□ 0.31
PFN1-203ENST00000574872 ASNSD1Q9NWL6 643 aa16.99■□□□□ 0.31
PFN1-203ENST00000574872 DUS2Q9NX74 493 aaKnown RBP16.99■□□□□ 0.31
PFN1-203ENST00000574872 GOLGA6L3A6NEY3 463 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 DAB1O75553 588 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 CALB1P05937 261 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 GLI1P08151 1106 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 ARSAP15289 507 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 TCF3P15923 654 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 IFNAR2P48551 515 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 PITX1P78337 314 aaPredicted RBP16.98■□□□□ 0.31
PFN1-203ENST00000574872 C1QBPQ07021 282 aaKnown RBP16.98■□□□□ 0.31
PFN1-203ENST00000574872 ARID5BQ14865 1188 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 ARHGAP29Q52LW3 1261 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 IER5LQ5T953 404 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 MSANTD2Q6P1R3 559 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 TAC4Q86UU9 113 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 UBALD2Q8IYN6 164 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 MCOLN2Q8IZK6 566 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 TC2NQ8N9U0 490 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 SLC2A13Q96QE2 648 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 CHP1Q99653 195 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 LINC00597Q9H2U6 94 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 EBF3Q9H4W6 596 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 FBXL21Q9UKT6 434 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 CA14Q9ULX7 337 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 CUL9Q8IWT3 2517 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 TRIOO75962 3097 aa16.98■□□□□ 0.31
PFN1-203ENST00000574872 SYNJ2BP-COX16A0A087WUM0 186 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 A0A087X0T9 212 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 CHADO15335 359 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 ATMINO43313 823 aaPredicted RBP16.97■□□□□ 0.31
PFN1-203ENST00000574872 STC2O76061 302 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 FTLP02792 175 aaPredicted RBP16.97■□□□□ 0.31
PFN1-203ENST00000574872 FAM228BP0C875 321 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 CDC25BP30305 580 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 COG7P83436 770 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 BBS7Q8IWZ6 715 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 EMC1Q8N766 993 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 OSCP1Q8WVF1 389 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 IRF7Q92985 503 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 DEF6Q9H4E7 631 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 FAM204AQ9H8W3 233 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 GRPEL1Q9HAV7 217 aa16.97■□□□□ 0.31
PFN1-203ENST00000574872 SLC2A4RGQ9NR83 387 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms