RNA–Protein interactions for RNA: ENST00000574428.5

ATPAF1-213, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 1 (best) BASIC

Gene ATPAF1, Length 1,760 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-213ENST00000574428 MTCL1Q9Y4B5 1905 aaKnown RBP25.08■■□□□ 1.61
ATPAF1-213ENST00000574428 CCDC66A2RUB6 948 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 KCNK3O14649 394 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 ZMYND10O75800 440 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 ZDHHC11BP0C7U3 371 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 RARGP13631 454 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 IL1R2P27930 398 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 PCK1P35558 622 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 PSEN1P49768 467 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 SCYL2Q6P3W7 929 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 RSRC2Q7L4I2 434 aaKnown RBP25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 STRADAQ7RTN6 431 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 TAC4Q86UU9 113 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 UBL4BQ8N7F7 174 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 RNF139Q8WU17 664 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 PEBP4Q96S96 227 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 OSBPL9Q96SU4 736 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 ZWILCHQ9H900 591 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 CLIC5Q9NZA1 410 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 USP18Q9UMW8 372 aa25.08■■□□□ 1.6
ATPAF1-213ENST00000574428 TADA3O75528 432 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 PEX5P50542 639 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 BNIPLQ7Z465 357 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 ELMOD1Q8N336 334 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 PDZD8Q8NEN9 1154 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 OVCA2Q8WZ82 227 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 ACSF2Q96CM8 615 aaPredicted RBP25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 MTPAPQ9NVV4 582 aaKnown RBP eCLIP25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 DDIT4Q9NX09 232 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 RRN3Q9NYV6 651 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 SAR1BQ9Y6B6 198 aa25.07■■□□□ 1.6
ATPAF1-213ENST00000574428 PSTPIP1O43586 416 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 TRUB2O95900 331 aaKnown RBP25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 DEUP1Q05D60 604 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 SMTNL2Q2TAL5 461 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 ATP13A4Q4VNC1 1196 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 ZNF697Q5TEC3 545 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 DCAF12L1Q5VU92 463 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 HS6ST3Q8IZP7 471 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 CASP10Q92851 521 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 CCSER2Q9H7U1 834 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 PIGVQ9NUD9 493 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 KLHL11Q9NVR0 708 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 SFMBT1Q9UHJ3 866 aa25.06■■□□□ 1.6
ATPAF1-213ENST00000574428 ZNF840PA6NDX5 716 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 ZNF185O15231 689 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 TBX18O95935 607 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 RALAP11233 206 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 RDXP35241 583 aaKnown RBP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 HADHQ16836 314 aaKnown RBP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 RTL10Q7L3V2 364 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 FAM131BQ86XD5 332 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 VN1R2Q8NFZ6 395 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 COG1Q8WTW3 980 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 HDAC7Q8WUI4 952 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 SMOC2Q9H3U7 446 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 TRPM5Q9NZQ8 1165 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 UXTQ9UBK9 157 aaPredicted RBP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 SPDYE4A6NLX3 237 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 PRPSAP2O60256 369 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 ENDOD1O94919 500 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 KCNT1Q5JUK3 1230 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 LRRC38Q5VT99 294 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 CYP4V2Q6ZWL3 525 aaPredicted RBP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 TMEM150AQ86TG1 271 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 TMC8Q8IU68 726 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 CORO1BQ9BR76 489 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 TTYH1Q9H313 450 aaPredicted RBP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 PRDM12Q9H4Q4 367 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 IGFLR1Q9H665 355 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 IL21Q9HBE4 155 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 HCFC1R1Q9NWW0 138 aa25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 SBDSQ9Y3A5 250 aaKnown RBP eCLIP25.05■■□□□ 1.6
ATPAF1-213ENST00000574428 MDM4O15151 490 aa25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 MSI1O43347 362 aaKnown RBP25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 TLR5O60602 858 aa25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 ZNF211Q13398 564 aaPredicted RBP25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 C10orf120Q5SQS8 335 aa25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 PGAP3Q96FM1 320 aaPredicted RBP25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 LRRC3Q9BY71 257 aa25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 DPP7Q9UHL4 492 aa25.04■■□□□ 1.6
ATPAF1-213ENST00000574428 IGLV3-25P01717 112 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 TCP1P17987 556 aaKnown RBP25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 HOXA9P31269 272 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 RWDD2BP57060 319 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 EFEMP1Q12805 493 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 ZFYVE27Q5T4F4 411 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 SNX30Q5VWJ9 437 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 MSANTD2Q6P1R3 559 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 POLNQ7Z5Q5 900 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 CCDC185Q8N715 623 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 UBE2Q2Q8WVN8 375 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 PPP2R3CQ969Q6 453 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 NCAPGQ9BPX3 1015 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 NSUN3Q9H649 340 aaKnown RBP25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 L2HGDHQ9H9P8 463 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 TRIOBPQ9H2D6 2365 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 F11P03951 625 aa25.03■■□□□ 1.6
ATPAF1-213ENST00000574428 HNRNPA1P09651 372 aaKnown RBP eCLIP25.03■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms