RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 PRKCQQ04759 706 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 TRIM14Q14142 442 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 PDGFRLQ15198 375 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 ASIC2Q16515 512 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 SLC44A4Q53GD3 710 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 EFHC1Q5JVL4 640 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 SFMBT2Q5VUG0 894 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 BEND5Q7L4P6 421 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 BHLHA9Q7RTU4 235 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 ERICH1Q86X53 443 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 ZDHHC17Q8IUH5 632 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 SCUBE3Q8IX30 993 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 C1orf131Q8NDD1 294 aaKnown RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 OSCP1Q8WVF1 389 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 BAP1Q92560 729 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 MSANTD3Q96H12 275 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 KLF16Q9BXK1 252 aaPredicted RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 TTYH3Q9C0H2 523 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 SYNCQ9H7C4 482 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 C8orf33Q9H7E9 229 aaPredicted RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 GKN1Q9NS71 199 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 DUS2Q9NX74 493 aaKnown RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 AIPL1Q9NZN9 384 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 TBC1D14Q9P2M4 693 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 CYTH4Q9UIA0 394 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 NOCTQ9UK39 431 aaKnown RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 LSM7Q9UK45 103 aaKnown RBP11.55□□□□□ -0.56
CHD3-216ENST00000573936 SH3BP1Q9Y3L3 701 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 MYH10P35580 1976 aa11.55□□□□□ -0.56
CHD3-216ENST00000573936 DNAH14Q0VDD8 3507 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 LRRC53A6NM62 1247 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 YJEFN3A6XGL0 299 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 E7ENQ6 273 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 PIK3R2O00459 728 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 GABBR2O75899 941 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 TBX18O95935 607 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 TPM1P09493 284 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 IFNAR2P48551 515 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 KPNA1P52294 538 aaPredicted RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 ZBED6P86452 979 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 AMPD2Q01433 879 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 FMO1Q01740 532 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 NR1H3Q13133 447 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 SPECC1LQ69YQ0 1117 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 OR6B2Q6IFH4 312 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 PPP1R2P3Q6NXS1 205 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 C1orf228Q6PIY5 440 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 ZC3H14Q6PJT7 736 aaKnown RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 SARM1Q6SZW1 724 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 TOGARAM2Q6ZUX3 1019 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 DGLUCYQ7Z3D6 616 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 NDRG1Q92597 394 aaKnown RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 SYN2Q92777 582 aaPredicted RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 ATP2A3Q93084 1043 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 FAM149B1Q96BN6 582 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 OTUB2Q96DC9 234 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 C18orf8Q96DM3 657 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 LRRC3BQ96PB8 259 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 CPXM1Q96SM3 734 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 AGPAT1Q99943 283 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 FAM83CQ9BQN1 747 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 DCLK3Q9C098 648 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 ASNSD1Q9NWL6 643 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 SMPD4Q9NXE4 827 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 MARCH2Q9P0N8 246 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 CFAP97Q9P2B7 532 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 RASAL2Q9UJF2 1139 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 CA14Q9ULX7 337 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 CAPN11Q9UMQ6 739 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 ZNF510Q9Y2H8 683 aa11.54□□□□□ -0.56
CHD3-216ENST00000573936 LUC7L2Q9Y383 392 aaKnown RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 BZW2Q9Y6E2 419 aaKnown RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 NUP210Q8TEM1 1887 aaPredicted RBP11.54□□□□□ -0.56
CHD3-216ENST00000573936 DENND4CQ5VZ89 1909 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 KRBA1A5PL33 1030 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 GOLGA6L3A6NEY3 463 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 MAN2B1O00754 1011 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 CAPN9O14815 690 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 PAPSS1O43252 624 aaPredicted RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 NFATC1O95644 943 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 CYP1A1P04798 512 aaPredicted RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 NCAM1P13591 858 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 TNFAIP3P21580 790 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 SCNN1AP37088 669 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 PRKCIP41743 596 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 GABRB2P47870 512 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 NOMO3P69849 1222 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 ZXDBP98169 803 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 SLC6A3Q01959 620 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 KLHL30Q0D2K2 578 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 EFEMP1Q12805 493 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 RUNX3Q13761 415 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 GSE1Q14687 1217 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 MLF2Q15773 248 aaPredicted RBP11.53□□□□□ -0.56
CHD3-216ENST00000573936 ITPRIPL2Q3MIP1 535 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 PTPN20Q4JDL3 420 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 NAA35Q5VZE5 725 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 MSANTD2Q6P1R3 559 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 HTR3DQ70Z44 454 aa11.53□□□□□ -0.56
CHD3-216ENST00000573936 IRF2BP2Q7Z5L9 587 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms