RNA–Protein interactions for RNA: ENST00000573519.5

NPLOC4-213, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best)

Gene NPLOC4, Length 654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-213ENST00000573519 TRIM59Q8IWR1 403 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 UBR7Q8N806 425 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 TXNDC5Q8NBS9 432 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 EHBP1Q8NDI1 1231 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 XPO6Q96QU8 1125 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 DNAJC17Q9NVM6 304 aaKnown RBP13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 KIAA1257Q9ULG3 409 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 STRIP2Q9ULQ0 834 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 MMP17Q9ULZ9 603 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 INVSQ9Y283 1065 aa13.33□□□□□ -0.28
NPLOC4-213ENST00000573519 SLC12A8A0AV02 714 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 M0QYV0 167 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 O00370 1275 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 PIK3R2O00459 728 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 DCLK1O15075 740 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 TRIM24O15164 1050 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 PMM2O15305 246 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 CALCAP01258 141 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 PAEPP09466 180 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 SETSIPP0DME0 302 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 BRD2P25440 801 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 GBP1P32455 592 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 TNFRSF4P43489 277 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 RGS7P49802 495 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 COG7P83436 770 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 CCDC6Q16204 474 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 CRY1Q16526 586 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 GRAMD4Q6IC98 578 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 ETFBKMTQ8IXQ9 262 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 PHTF2Q8N3S3 785 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 TERB1Q8NA31 727 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 IL17RCQ8NAC3 791 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 RBBP8NLQ8NC74 664 aaPredicted RBP13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 LMO3Q8TAP4 145 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 TFAP2BQ92481 460 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 MED15Q96RN5 788 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 INTS2Q9H0H0 1204 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 NUP62CLQ9H1M0 184 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 ARRDC1-AS1Q9H2J1 176 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 SEMA4GQ9NTN9 838 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 PLK2Q9NYY3 685 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 MARCH2Q9P0N8 246 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 BCCIPQ9P287 314 aaKnown RBP eCLIP13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 WDR35Q9P2L0 1181 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 EBF1Q9UH73 591 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 RWDD2AQ9UIY3 292 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 FRYLO94915 3013 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 KIAA1549LQ6ZVL6 1849 aa13.32□□□□□ -0.28
NPLOC4-213ENST00000573519 RNF225M0QZC1 329 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 SGK1O00141 431 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 ALDH1A2O94788 518 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 KRT5P13647 590 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 CORO1AP31146 461 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 KIR2DL1P43626 348 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 MARSP56192 900 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 TPD52L1Q16890 204 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 EOGTQ5NDL2 527 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 PM20D1Q6GTS8 502 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 LCLAT1Q6UWP7 414 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 DGLUCYQ7Z3D6 616 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 DENND1CQ8IV53 801 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 PGBD3Q8N328 593 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 ZNF276Q8N554 614 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 ZNF513Q8N8E2 541 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 GPT2Q8TD30 523 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 RNF139Q8WU17 664 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 EDEM1Q92611 657 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 CNOT6LQ96LI5 555 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 GBP4Q96PP9 640 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 DCLK3Q9C098 648 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 POLMQ9NP87 494 aaPredicted RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 CDV3Q9UKY7 258 aaKnown RBP13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 ZNF510Q9Y2H8 683 aa13.31□□□□□ -0.28
NPLOC4-213ENST00000573519 A0A0A0MRY4 1105 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 TCRBV21S2A2A0A5A6 115 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 YJEFN3A6XGL0 299 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 PRR5-ARHGAP8B1AHC4 643 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 E7ENQ6 273 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 CACNG3O60359 315 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 LRP3O75074 770 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 KLKB1P03952 638 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 TGM1P22735 817 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 CHKAP35790 457 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 WASP42768 502 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 DGKGP49619 791 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 ARHGAP8P85298 464 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 GCNT1Q02742 428 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 PUM1Q14671 1186 aaKnown RBP eCLIP13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 STILQ15468 1287 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 ELF2Q15723 593 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 CSRP2Q16527 193 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 HSF5Q4G112 596 aaPredicted RBP13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 USP39Q53GS9 565 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 BSPRYQ5W0U4 402 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 Q6ZNB5 142 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 PRR23CQ6ZRP0 262 aa13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 TRMT11Q7Z4G4 463 aaKnown RBP13.3□□□□□ -0.28
NPLOC4-213ENST00000573519 MDGA1Q8NFP4 955 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms