RNA–Protein interactions for RNA: ENST00000572857.5

CHRNB1-204, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 4

Gene CHRNB1, Length 539 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-204ENST00000572857 TULP2O00295 520 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 STC2O76061 302 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 TYRP14679 529 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 HNRNPLP14866 589 aaKnown RBP eCLIP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 TBXAS1P24557 533 aaPredicted RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 PDE4CQ08493 712 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 ELF2Q15723 593 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 EOGTQ5NDL2 527 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 C10orf76Q5T2E6 689 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 GRAMD4Q6IC98 578 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 NUDT18Q6ZVK8 323 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 RSRC2Q7L4I2 434 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 ARHGAP18Q8N392 663 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 UBA3Q8TBC4 463 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 NDRG1Q92597 394 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 ZC3H10Q96K80 434 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 NT5C1BQ96P26 610 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 CDK5RAP1Q96SZ6 601 aaKnown RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 DUSP15Q9H1R2 295 aaPredicted RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 WDR35Q9P2L0 1181 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 CIZ1Q9ULV3 898 aaPredicted RBP21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 MYH10P35580 1976 aa21.84■■□□□ 1.09
CHRNB1-204ENST00000572857 DCDC2BA2VCK2 349 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 GDF9O60383 454 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 ALDH1A2O94788 518 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 EPN2O95208 641 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 ZBED1O96006 694 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 CHRM1P11229 460 aaPredicted RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 BCAT1P54687 386 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 YWHAGP61981 247 aaKnown RBP eCLIP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 CETN1Q12798 172 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 SF3A2Q15428 464 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 HSF5Q4G112 596 aaPredicted RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 RAB41Q5JT25 222 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 TMEM270Q6UE05 265 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 RASSF3Q86WH2 238 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 PPM1KQ8N3J5 372 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 ZNF276Q8N554 614 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 ZNF513Q8N8E2 541 aaPredicted RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 TERB1Q8NA31 727 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 MDGA1Q8NFP4 955 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 CNOT6LQ96LI5 555 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 XPO6Q96QU8 1125 aaKnown RBP21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 ULBP1Q9BZM6 244 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 LRRC4Q9HBW1 653 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 PCDHB4Q9Y5E5 795 aa21.83■■□□□ 1.09
CHRNB1-204ENST00000572857 MED19A0JLT2 244 aaPredicted RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 XPO1O14980 1071 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 ADAM23O75077 832 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 RHOBTB1O94844 696 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 KLKB1P03952 638 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 VDRP11473 427 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 COG7P83436 770 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 BST2Q10589 180 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 Q6ZNB5 142 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 UBR7Q8N806 425 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 C12orf50Q8NA57 414 aaPredicted RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 NETO1Q8TDF5 533 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 IPO9Q96P70 1041 aaKnown RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 SMOC1Q9H4F8 434 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 POLMQ9NP87 494 aaPredicted RBP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 PLK2Q9NYY3 685 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 MARCH2Q9P0N8 246 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 BCCIPQ9P287 314 aaKnown RBP eCLIP21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 MYOFQ9NZM1 2061 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 CACNA1AO00555 2505 aa21.82■■□□□ 1.08
CHRNB1-204ENST00000572857 O00370 1275 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 CACNG3O60359 315 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 WASP42768 502 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 PAK1Q13153 545 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 CAMK4Q16566 473 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 AASDHQ4L235 1098 aaPredicted RBP21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 RRAGAQ7L523 313 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 PGBD3Q8N328 593 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 HMGB4Q8WW32 186 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 TFAP2BQ92481 460 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 KAT5Q92993 513 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 RTKNQ9BST9 563 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 SRRTQ9BXP5 876 aaKnown RBP21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 MARK1Q9P0L2 795 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 KIAA1257Q9ULG3 409 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 STRIP2Q9ULQ0 834 aa21.81■■□□□ 1.08
CHRNB1-204ENST00000572857 TCRBV21S2A2A0A5A6 115 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 SLC12A8A0AV02 714 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 PMM2O15305 246 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 FOXD2O60548 495 aaPredicted RBP21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 ZNF806P0C7X5 589 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 CORO1AP31146 461 aaKnown RBP21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 MPLP40238 635 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 CREB5Q02930 508 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 ADIGQ0VDE8 80 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 PM20D1Q6GTS8 502 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 TOGARAM2Q6ZUX3 1019 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 RLN3Q8WXF3 142 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 ZNF510Q9Y2H8 683 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 PCDHGA5Q9Y5G8 931 aa21.8■■□□□ 1.08
CHRNB1-204ENST00000572857 RNF225M0QZC1 329 aaPredicted RBP21.79■■□□□ 1.08
CHRNB1-204ENST00000572857 P4HA2O15460 535 aa21.79■■□□□ 1.08
CHRNB1-204ENST00000572857 GNA14O95837 355 aa21.79■■□□□ 1.08
CHRNB1-204ENST00000572857 CALCAP01258 141 aa21.79■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms