RNA–Protein interactions for RNA: ENST00000572760.5

NPLOC4-209, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 1 (best) BASIC

Gene NPLOC4, Length 946 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-209ENST00000572760 TAF5Q15542 800 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 DCAF6Q58WW2 860 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 TANGO2Q6ICL3 276 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 DCUN1D2Q6PH85 259 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 KLHDC10Q6PID8 442 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 POTEHQ6S545 545 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 PARM1Q6UWI2 310 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 DDX42Q86XP3 938 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 DNAAF5Q86Y56 855 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 USP13Q92995 863 aaPredicted RBP15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 NXPE3Q969Y0 559 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 KXD1Q9BQD3 176 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 ISCUQ9H1K1 167 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 SPTLC3Q9NUV7 552 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 MYO1AQ9UBC5 1043 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 CNOT8Q9UFF9 292 aaKnown RBP15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 SFMBT1Q9UHJ3 866 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 STAP1Q9ULZ2 295 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 ARHGAP26Q9UNA1 814 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 NAALADL1Q9UQQ1 740 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 SH3BP1Q9Y3L3 701 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 NUMBLQ9Y6R0 609 aa15.17■□□□□ 0.02
NPLOC4-209ENST00000572760 NCOR1O75376 2440 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 PRUNE2Q8WUY3 3088 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC12A8A0AV02 714 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 ECI2O75521 394 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 PRAMEF12O95522 483 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 PTMAP06454 111 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 HMBSP08397 361 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 H2AFZP0C0S5 128 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 MYBL1P10243 752 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 IRF1P10914 325 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 RRM1P23921 792 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 NOS2P35228 1153 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 COG7P83436 770 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 HTR4Q13639 388 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 SPA17Q15506 151 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 ASTE1Q2TB18 679 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 CC2D1AQ6P1N0 951 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 H2AFVQ71UI9 128 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 BEND5Q7L4P6 421 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 CCDC170Q8IYT3 715 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 C3orf20Q8ND61 904 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 BPIFB1Q8TDL5 484 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 SH3RF2Q8TEC5 729 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 FGF14Q92915 247 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 ELSPBP1Q96BH3 223 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 KCNK12Q9HB15 430 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 TRPV4Q9HBA0 871 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 LUC7LQ9NQ29 371 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 PARVAQ9NVD7 372 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 THG1LQ9NWX6 298 aaKnown RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 OBP2AQ9NY56 170 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 CCL26Q9Y258 94 aa15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 KIF26AQ9ULI4 1882 aaPredicted RBP15.16■□□□□ 0.02
NPLOC4-209ENST00000572760 SIGLEC16A6NMB1 481 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 ANHXE9PGG2 379 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 LEFTY2O00292 366 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 FYNP06241 537 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 ASGR2P07307 311 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 DESP17661 470 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 GBP1P32455 592 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 MATKP42679 507 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 KPNA1P52294 538 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 GALCP54803 685 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 GSCP56915 257 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 SYPL2Q5VXT5 272 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 MSANTD2Q6P1R3 559 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 GJD3Q8N144 294 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 ADAMTS19Q8TE59 1207 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 DQX1Q8TE96 717 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 DEPDC1BQ8WUY9 529 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 RSAD2Q8WXG1 361 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 CTNNBL1Q8WYA6 563 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 SERPINB11Q96P15 392 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 SLC2A13Q96QE2 648 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 KLF16Q9BXK1 252 aaPredicted RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 FAM204AQ9H8W3 233 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 MRPL47Q9HD33 250 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 GKN1Q9NS71 199 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 RRN3Q9NYV6 651 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 CFAP97Q9P2B7 532 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 LSM7Q9UK45 103 aaKnown RBP15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 SCINQ9Y6U3 715 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 EYSQ5T1H1 3165 aa15.15■□□□□ 0.02
NPLOC4-209ENST00000572760 SYNJ2BP-COX16A0A087WUM0 186 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 SOWAHDA6NJG2 315 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 C19orf67A6NJJ6 358 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 GJB6O95452 261 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 TRUB2O95900 331 aaKnown RBP15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 PSMC3P17980 439 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 FCARP24071 287 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 SDC4P31431 198 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 MAGEA1P43355 309 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 SULT1E1P49888 294 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 TBX4P57082 545 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 GPC5P78333 572 aa15.14■□□□□ 0.01
NPLOC4-209ENST00000572760 GRM2Q14416 872 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms