RNA–Protein interactions for RNA: ENST00000572656.2

TRAPPC1-205, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-205ENST00000572656 RAB44Q7Z6P3 723 aaPredicted RBP10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 SLC9A9Q8IVB4 645 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 RGL4Q8IZJ4 473 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 CHCHD4Q8N4Q1 142 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 C12orf29Q8N999 325 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 OR2I1PQ8NGU4 316 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 FOXJ1Q92949 421 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 ERLEC1Q96DZ1 483 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 MRGPRX1Q96LB2 322 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 HNRNPABQ99729 332 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 FOXD4L1Q9NU39 408 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 FAM49BQ9NUQ9 324 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 OSER1Q9NX31 292 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 CACNA2D2Q9NY47 1150 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 HMGXB4Q9UGU5 601 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 DNMT3LQ9UJW3 386 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 RAD54BQ9Y620 910 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 ATG2BQ96BY7 2078 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZNF638Q14966 1978 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 IGF2RP11717 2491 aa10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 HELZP42694 1942 aaKnown RBP10.41□□□□□ -0.74
TRAPPC1-205ENST00000572656 ABCA7Q8IZY2 2146 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 HHLA1C9JL84 531 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 CYP26A1O43174 497 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 SH3BP5O60239 455 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 GJB3O75712 270 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 ASS1P00966 412 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 RARGP13631 454 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 HOXB3P14651 431 aaPredicted RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 GNSP15586 552 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 TRIM21P19474 475 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 ACO1P21399 889 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 ADORA2BP29275 332 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 AFMP43652 599 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 PLA2G4AP47712 749 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 DLG4P78352 724 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 RING1Q06587 406 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 TRIP6Q15654 476 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 WDR45BQ5MNZ6 344 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 Q6ZNB5 142 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 CLEC20AQ6ZU45 233 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 GPRIN1Q7Z2K8 1008 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 METTL3Q86U44 580 aaKnown RBP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 TMC2Q8TDI7 906 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 CAMK1GQ96NX5 476 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZDHHC5Q9C0B5 715 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 SLC6A17Q9H1V8 727 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 NMUR1Q9HB89 426 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 PNPLA8Q9NP80 782 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 MTPAPQ9NVV4 582 aaKnown RBP eCLIP10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 FAM13BQ9NYF5 915 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 FBXO10Q9UK96 956 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 LHX6Q9UPM6 363 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 PCDHA5Q9Y5H7 936 aa10.4□□□□□ -0.74
TRAPPC1-205ENST00000572656 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 A0A1W2PQH9 124 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 WASH3PC4AMC7 463 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 IKBKBO14920 756 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 NPC1O15118 1278 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 MDM4O15151 490 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 CAPNS1P04632 268 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 CD6P30203 668 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ASPAP45381 313 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 PSEN1P49768 467 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZNF132P52740 706 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 INCA1Q0VD86 236 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 STK4Q13043 487 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 STARD3Q14849 445 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 C10orf120Q5SQS8 335 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 KIAA1324Q6UXG2 1013 aaKnown RBP10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 SV2AQ7L0J3 742 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 TADA2BQ86TJ2 420 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZNF276Q8N554 614 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ADAMTS14Q8WXS8 1223 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 DNASE2BQ8WZ79 361 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 BHMTQ93088 406 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 JAKMIP2Q96AA8 810 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 CYFIP2Q96F07 1278 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 BACH2Q9BYV9 841 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 KCTD10Q9H3F6 313 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 PRDM16Q9HAZ2 1276 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 CD93Q9NPY3 652 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ITM2CQ9NQX7 267 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 PLK2Q9NYY3 685 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 ZNF510Q9Y2H8 683 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 SLC27A6Q9Y2P4 619 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 NFE2L3Q9Y4A8 694 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 PCDHB9Q9Y5E1 797 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 STON1Q9Y6Q2 735 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 FAM208BQ5VWN6 2430 aa10.39□□□□□ -0.75
TRAPPC1-205ENST00000572656 THADAQ6YHU6 1953 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 A0A1B0GTW7 788 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 K7ELQ4 463 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 TAF4O00268 1085 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 PDXKO00764 312 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 KLRC4O43908 158 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 STC2O76061 302 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 PENKP01210 267 aaPredicted RBP10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 HLA-DRAP01903 254 aa10.38□□□□□ -0.75
TRAPPC1-205ENST00000572656 KLKB1P03952 638 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms