RNA–Protein interactions for RNA: ENST00000571739.5

TRAPPC1-203, Transcript of trafficking protein particle complex 1, humanhuman

TSL 3

Gene TRAPPC1, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-203ENST00000571739 C2CD6Q53TS8 623 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 E4F1Q66K89 784 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 NAIF1Q69YI7 327 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 ASTLQ6HA08 431 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 ZNF852Q6ZMS4 543 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 Q6ZNB5 142 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 CACNA2D4Q7Z3S7 1137 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 RALGPS2Q86X27 583 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 MIB1Q86YT6 1006 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 BBS7Q8IWZ6 715 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 CPA5Q8WXQ8 436 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 FAM3CQ92520 227 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 SHDQ96IW2 340 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 SYT11Q9BT88 431 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 XPO4Q9C0E2 1151 aaKnown RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 NACA2Q9H009 215 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 RBSNQ9H1K0 784 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 MFSD1Q9H3U5 465 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 C8orf33Q9H7E9 229 aaPredicted RBP9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 LTB4R2Q9NPC1 389 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 AIPL1Q9NZN9 384 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 MARCH2Q9P0N8 246 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 DLGAP2Q9P1A6 1054 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 RASAL2Q9UJF2 1139 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 SH3BP1Q9Y3L3 701 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 COL4A2P08572 1712 aa9.1□□□□□ -0.95
TRAPPC1-203ENST00000571739 MYOFQ9NZM1 2061 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TICRRQ7Z2Z1 1910 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 KIF26AQ9ULI4 1882 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 MYO16Q9Y6X6 1858 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 SLC12A8A0AV02 714 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 LRRC53A6NM62 1247 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 MAN2B1O00754 1011 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TRDMT1O14717 391 aaKnown RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 DCNP07585 359 aaKnown RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 IRF1P10914 325 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 CHRNB1P11230 501 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 NCAM1P13591 858 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 CTHP32929 405 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 SLC6A11P48066 632 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 IFNAR2P48551 515 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 KPNA1P52294 538 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 YWHAZP63104 245 aaKnown RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 NOMO3P69849 1222 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 PITX1P78337 314 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 COG7P83436 770 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 EIF4EBP2Q13542 120 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TRIP4Q15650 581 aaPredicted RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 FIGNQ5HY92 759 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 OR6B2Q6IFH4 312 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 MSANTD2Q6P1R3 559 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 FAM183BPQ6ZVS7 135 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 BEND5Q7L4P6 421 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 DDX42Q86XP3 938 aaKnown RBP eCLIP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 ZNF677Q86XU0 584 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TMEM25Q86YD3 366 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 FMNL3Q8IVF7 1028 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 CCDC105Q8IYK2 499 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TMEM35BQ8NCS4 154 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 PJA1Q8NG27 643 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 RNF139Q8WU17 664 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 CLDN23Q96B33 292 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 CDK5RAP1Q96SZ6 601 aaKnown RBP9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 NELL2Q99435 816 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 AGPAT1Q99943 283 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 OSBPL6Q9BZF3 934 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 EDEM3Q9BZQ6 932 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 PDCL3Q9H2J4 239 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 TBC1D14Q9P2M4 693 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 MYO6Q9UM54 1294 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 SIT1Q9Y3P8 196 aa9.09□□□□□ -0.95
TRAPPC1-203ENST00000571739 F5P12259 2224 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 HELZP42694 1942 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 ANTXRLA6NF34 631 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 SLC9A3R1O14745 358 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 MSI1O43347 362 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 GRAP2O75791 330 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 IGLV3-27P01718 113 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 CYP17A1P05093 508 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 HMBSP08397 361 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 SKILP12757 684 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 FERP16591 822 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 OPRD1P41143 372 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 SLC6A3Q01959 620 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 MESP2Q0VG99 397 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 PTP4A2Q12974 167 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 UBXN2BQ14CS0 331 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 PON2Q15165 354 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 TMEM196Q5HYL7 178 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 EFHC1Q5JVL4 640 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 LY6G5CQ5SRR4 150 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 NAA35Q5VZE5 725 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 OLFML1Q6UWY5 402 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 RSRC2Q7L4I2 434 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 TADA2BQ86TJ2 420 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 ERICH1Q86X53 443 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 SUGP1Q8IWZ8 645 aaKnown RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 DEFB106AQ8N104 65 aa9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 ZNF397Q8NF99 534 aaPredicted RBP9.08□□□□□ -0.96
TRAPPC1-203ENST00000571739 SLC30A5Q8TAD4 765 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms