RNA–Protein interactions for RNA: ENST00000570273.5

HERPUD1-219, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 1 (best)

Gene HERPUD1, Length 1,425 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-219ENST00000570273 NPY6RQ99463 290 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 NCAPGQ9BPX3 1015 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 CORO1BQ9BR76 489 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 TLR10Q9BXR5 811 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 ASAH2Q9NR71 780 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 DZANK1Q9NVP4 752 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 DDIT4Q9NX09 232 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 ZDHHC7Q9NXF8 308 aa16.09■□□□□ 0.17
HERPUD1-219ENST00000570273 PSTPIP1O43586 416 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 TADA3O75528 432 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 TRUB2O95900 331 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 TCF4P15884 667 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 MIPP30301 263 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 CTNNA1P35221 906 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 PCK1P35558 622 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 DEUP1Q05D60 604 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 NME3Q13232 169 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 HADHQ16836 314 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 RAB6CQ53S08 254 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 C10orf120Q5SQS8 335 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 MSANTD2Q6P1R3 559 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 SCYL2Q6P3W7 929 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 STRADAQ7RTN6 431 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 TMC8Q8IU68 726 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 RHOT1Q8IXI2 618 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 HS6ST3Q8IZP7 471 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 ARFGAP1Q8N6T3 406 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 UBL4BQ8N7F7 174 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 VN1R2Q8NFZ6 395 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 CENPIQ92674 756 aaPredicted RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 CD101Q93033 1021 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 NT5C3BQ969T7 300 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 HES6Q96HZ4 224 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 CDK5RAP1Q96SZ6 601 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 ADAM33Q9BZ11 813 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 RAB6CQ9H0N0 254 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 SMOC2Q9H3U7 446 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 OLA1Q9NTK5 396 aaKnown RBP16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 PCSK1NQ9UHG2 260 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 NUDT5Q9UKK9 219 aa16.08■□□□□ 0.16
HERPUD1-219ENST00000570273 CCDC66A2RUB6 948 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 ZNF840PA6NDX5 716 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 PRPSAP2O60256 369 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 TLR5O60602 858 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 POU2F2P09086 479 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 MYL4P12829 197 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 GABRR2P28476 465 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 GBP1P32455 592 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 PPP3CCP48454 512 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 MARCKSL1P49006 195 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 ATXN1P54253 815 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 HDAC4P56524 1084 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 SLC25A11Q02978 314 aaKnown RBP16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 HYAL1Q12794 435 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 EFEMP1Q12805 493 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 GRIN2CQ14957 1233 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 HECTD3Q5T447 861 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 TADA2BQ86TJ2 420 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 KRT35Q92764 455 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 PSMB7Q99436 277 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 PRKD2Q9BZL6 878 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 CCSER2Q9H7U1 834 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 ZWILCHQ9H900 591 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 SFXN1Q9H9B4 322 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 IL21Q9HBE4 155 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 LMCD1Q9NZU5 365 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 RASAL2Q9UJF2 1139 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 GREB1Q4ZG55 1949 aa16.07■□□□□ 0.16
HERPUD1-219ENST00000570273 MDM4O15151 490 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 DDX3YO15523 660 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 IRAK2O43187 625 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 F11P03951 625 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SRGAP2BP0DMP2 458 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 CDC25CP30307 473 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 PABPC1LQ4VXU2 614 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 ZFYVE27Q5T4F4 411 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SNX30Q5VWJ9 437 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SND1Q7KZF4 910 aaKnown RBP eCLIP16.06■□□□□ 0.164e-8■■■□□ 18
HERPUD1-219ENST00000570273 BNIPLQ7Z465 357 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 FAM131BQ86XD5 332 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 EFHBQ8N7U6 833 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 C12orf76Q8N812 135 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 MRPS31Q92665 395 aaKnown RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 PGAP3Q96FM1 320 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SERPINB11Q96P15 392 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 PEBP4Q96S96 227 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 LRRC3Q9BY71 257 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 NACA2Q9H009 215 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 TRPC7Q9HCX4 862 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 RRAGDQ9NQL2 400 aaPredicted RBP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 PIGVQ9NUD9 493 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 HCFC1R1Q9NWW0 138 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 CALCOCO1Q9P1Z2 691 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SFMBT1Q9UHJ3 866 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 USP18Q9UMW8 372 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SNX12Q9UMY4 172 aa16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.06■□□□□ 0.16
HERPUD1-219ENST00000570273 EYSQ5T1H1 3165 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms