RNA–Protein interactions for RNA: ENST00000570129.1

GTF3C1-212, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 505 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-212ENST00000570129 NOCTQ9UK39 431 aaKnown RBP10.29□□□□□ -0.76
GTF3C1-212ENST00000570129 HCN2Q9UL51 889 aa10.29□□□□□ -0.76
GTF3C1-212ENST00000570129 ZFHX2Q9C0A1 2572 aaPredicted RBP10.29□□□□□ -0.76
GTF3C1-212ENST00000570129 CACNA1IQ9P0X4 2223 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 TSPAN3O60637 253 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 SETSIPP0DME0 302 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 CHRM1P11229 460 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 ATP5C1P36542 298 aaKnown RBP10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 PPP3CCP48454 512 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 IFNAR2P48551 515 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 SGSHP51688 502 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 FANCCQ00597 558 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 PFKPQ01813 784 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 PRKCQQ04759 706 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 GOLGA8FQ08AF8 430 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 GOLGA8DPQ0D2H9 430 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 PDCLQ13371 301 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 NR1I3Q14994 352 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 PTPN20Q4JDL3 420 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 TRNP1Q6NT89 227 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 CC2D1AQ6P1N0 951 aaPredicted RBP10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 ZNF852Q6ZMS4 543 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 Q6ZNB5 142 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 TPGS1Q6ZTW0 290 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 FAM183BPQ6ZVS7 135 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 ENOSF1Q7L5Y1 443 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 TMEM110Q86TL2 294 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 FMNL3Q8IVF7 1028 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 SIX6OS1Q8N1H7 587 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 SLC30A5Q8TAD4 765 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 BAP1Q92560 729 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 CLDN23Q96B33 292 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 ERGIC2Q96RQ1 377 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 NACA2Q9H009 215 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 TRPV5Q9NQA5 729 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 MARCH2Q9P0N8 246 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 DNMT3LQ9UJW3 386 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 MYOFQ9NZM1 2061 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 MYH10P35580 1976 aa10.28□□□□□ -0.76
GTF3C1-212ENST00000570129 KIF26AQ9ULI4 1882 aaPredicted RBP10.27□□□□□ -0.76
GTF3C1-212ENST00000570129 A0A1B0GTH6 734 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SOBPA7XYQ1 873 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SMTNL1A8MU46 457 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 TCF3P15923 654 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 RFX1P22670 979 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SOX5P35711 763 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 PXNP49023 591 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 NUMBP49757 651 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SEC13P55735 322 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 FMO1Q01740 532 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SATB1Q01826 763 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 PTK2Q05397 1052 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 KDSRQ06136 332 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 PDGFRLQ15198 375 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 FKBP15Q5T1M5 1219 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 NAA35Q5VZE5 725 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 BTBD8Q5XKL5 378 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 TOGARAM2Q6ZUX3 1019 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 HTR3DQ70Z44 454 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 IRF2BP2Q7Z5L9 587 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 GAS2L3Q86XJ1 694 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 DENND1CQ8IV53 801 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 EPS8L1Q8TE68 723 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 PPP1R13BQ96KQ4 1090 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 MAGEB5Q9BZ81 275 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 FAM124BQ9H5Z6 455 aaPredicted RBP10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 KIF9Q9HAQ2 790 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 ANLNQ9NQW6 1124 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 TMPRSS4Q9NRS4 437 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 TAS2R14Q9NYV8 317 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 CLIC5Q9NZA1 410 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 EHD2Q9NZN4 543 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 AGO1Q9UL18 857 aaKnown RBP10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 SNX10Q9Y5X0 201 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 GPR179Q6PRD1 2367 aa10.27□□□□□ -0.77
GTF3C1-212ENST00000570129 PATJQ8NI35 1801 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 ATG2BQ96BY7 2078 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 KMT2EQ8IZD2 1858 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 NUP210Q8TEM1 1887 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 E2F8A0AVK6 867 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 K7EQS6 105 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 GALR2O43603 387 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 LTFP02788 710 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 RALAP11233 206 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 SKILP12757 684 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 HNRNPLP14866 589 aaKnown RBP eCLIP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 CORO1AP31146 461 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 KRT9P35527 623 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 PBX1P40424 430 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 TUBP50607 506 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 ATXN1P54253 815 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 RNASE9P60153 205 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 CCINQ13939 588 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 TMEM196Q5HYL7 178 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 OTUD1Q5VV17 481 aaPredicted RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 NADSYN1Q6IA69 706 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 OR6B2Q6IFH4 312 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 RFWD3Q6PCD5 774 aa10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 RSRC2Q7L4I2 434 aaKnown RBP10.26□□□□□ -0.77
GTF3C1-212ENST00000570129 TAC4Q86UU9 113 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 65.7 ms