RNA–Protein interactions for RNA: ENST00000569720.1

SPG7-221, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 909 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-221ENST00000569720 WBP2Q969T9 261 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 TWNKQ96RR1 684 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 CDK5RAP1Q96SZ6 601 aaKnown RBP13.83□□□□□ -0.2
SPG7-221ENST00000569720 MMRN2Q9H8L6 949 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 TMEM8AQ9HCN3 771 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 EVLQ9UI08 416 aaPredicted RBP13.83□□□□□ -0.2
SPG7-221ENST00000569720 DNMT3LQ9UJW3 386 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 MAPK8IP1Q9UQF2 711 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 STARD13Q9Y3M8 1113 aa13.83□□□□□ -0.2
SPG7-221ENST00000569720 GON4LQ3T8J9 2241 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 FAM237AA0A1B0GTK4 181 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 A0A1W2PQH9 124 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 PATE3B3GLJ2 98 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 HHLA1C9JL84 531 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 AP5Z1O43299 807 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 CACNG3O60359 315 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 STX10O60499 249 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 CILPO75339 1184 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 PRR29P0C7W0 189 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 RALAP11233 206 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 TYRP14679 529 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 GTF2H1P32780 548 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 PGFP49763 221 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 UBE2HP62256 183 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 SHC2P98077 582 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 PPP3CAQ08209 521 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 DPYDQ12882 1025 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 MAP7D1Q3KQU3 841 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 TRIM61Q5EBN2 209 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 C10orf120Q5SQS8 335 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 LYSMD4Q5XG99 296 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 KRT39Q6A163 491 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 KRBA2Q6ZNG9 492 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 TPGS1Q6ZTW0 290 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 ARMCX6Q7L4S7 300 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 GPRIN1Q7Z2K8 1008 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 SYT12Q8IV01 421 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 DUSP16Q9BY84 665 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 APOBEC3GQ9HC16 384 aaKnown RBP13.82□□□□□ -0.2
SPG7-221ENST00000569720 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.82□□□□□ -0.2
SPG7-221ENST00000569720 MARK1Q9P0L2 795 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 NAGPAQ9UK23 515 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 ZNF510Q9Y2H8 683 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 CEP295Q9C0D2 2601 aa13.82□□□□□ -0.2
SPG7-221ENST00000569720 GREM1O60565 184 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 WASP42768 502 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 DGKGP49619 791 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 KIF11P52732 1056 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 IRX4P78413 519 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 RPL6Q02878 288 aaKnown RBP13.81□□□□□ -0.2
SPG7-221ENST00000569720 UAP1L1Q3KQV9 507 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 CCDC186Q7Z3E2 898 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 CHPFQ8IZ52 775 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 ZNF276Q8N554 614 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 FAXDC2Q96IV6 333 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 HEXIM2Q96MH2 286 aaKnown RBP13.81□□□□□ -0.2
SPG7-221ENST00000569720 NMUR1Q9HB89 426 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 OSER1Q9NX31 292 aa13.81□□□□□ -0.2
SPG7-221ENST00000569720 MBD1Q9UIS9 605 aaPredicted RBP13.81□□□□□ -0.2
SPG7-221ENST00000569720 CDX4O14627 284 aaPredicted RBP13.8□□□□□ -0.2
SPG7-221ENST00000569720 TRIM24O15164 1050 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 ZNF217O75362 1048 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 KRT37O76014 449 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 EPB41P11171 864 aaKnown RBP13.8□□□□□ -0.2
SPG7-221ENST00000569720 CEACAM1P13688 526 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 GABRG2P18507 467 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 CSRP1P21291 193 aaKnown RBP13.8□□□□□ -0.2
SPG7-221ENST00000569720 HOXD12P35452 270 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 PTGER3P43115 390 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 MXI1P50539 228 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 SLC8A3P57103 927 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 COG7P83436 770 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 ZNF252P-AS1Q0IIN9 211 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 EDRF1Q3B7T1 1238 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 ZNF394Q53GI3 561 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 PPP1R26Q5T8A7 1209 aaPredicted RBP13.8□□□□□ -0.2
SPG7-221ENST00000569720 SH3PXD2AQ5TCZ1 1133 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 EGFLAMQ63HQ2 1017 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 RABEPKQ7Z6M1 372 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 FRMD1Q8N878 549 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 FBXL13Q8NEE6 735 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 CEP76Q8TAP6 659 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 DCLK3Q9C098 648 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 FAM124BQ9H5Z6 455 aaPredicted RBP13.8□□□□□ -0.2
SPG7-221ENST00000569720 CLIC5Q9NZA1 410 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 CALCOCO1Q9P1Z2 691 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 NUDT5Q9UKK9 219 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 ADAMTS9Q9P2N4 1935 aa13.8□□□□□ -0.2
SPG7-221ENST00000569720 USP24Q9UPU5 2620 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 ASCC3Q8N3C0 2202 aaKnown RBP13.79□□□□□ -0.2
SPG7-221ENST00000569720 GFRA2O00451 464 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 MDM4O15151 490 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 CETN3O15182 167 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 ZNF202O95125 648 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 CHKAP35790 457 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 ATXN3P54252 364 aaPredicted RBP13.79□□□□□ -0.2
SPG7-221ENST00000569720 E2F5Q15329 346 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 DUOXA1Q1HG43 343 aa13.79□□□□□ -0.2
SPG7-221ENST00000569720 SKOR2Q2VWA4 1001 aaPredicted RBP13.79□□□□□ -0.2
SPG7-221ENST00000569720 SLC23A3Q6PIS1 610 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms