RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 ABCB6Q9NP58 842 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 SPHK2Q9NRA0 654 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 CFAP97Q9P2B7 532 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 DSEQ9UL01 958 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 UBQLN1Q9UMX0 589 aaKnown RBP7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 VPS4AQ9UN37 437 aa7.08□□□□□ -1.28
HERPUD1-217ENST00000569429 A0A1B0GVM2 712 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 ABLIM1O14639 778 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 SLC37A4O43826 429 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CACNG3O60359 315 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 IGHV4-34P06331 123 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 LIPCP11150 499 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CKMT1AP12532 417 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 PRF1P14222 555 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 PROZP22891 400 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CD38P28907 300 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CYP4F2P78329 520 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 PPP2R5AQ15172 486 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 ANO4Q32M45 955 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 MANEAQ5SRI9 462 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 TMEM25Q86YD3 366 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CCDC148Q8NFR7 591 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 CCDC43Q96MW1 224 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 XPO6Q96QU8 1125 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 PLEKHA5Q9HAU0 1116 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 TMLHEQ9NVH6 421 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 DNAJC17Q9NVM6 304 aaKnown RBP7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 WDR70Q9NW82 654 aa7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 THAP10Q9P2Z0 257 aaPredicted RBP7.07□□□□□ -1.28
HERPUD1-217ENST00000569429 PMS2P1A4D2B8 440 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 K7ERI5 159 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 PPEF2O14830 753 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 ZBTB43O43298 467 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 HNRNPRO43390 633 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 XPOTO43592 962 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 RTN2O75298 545 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 OAS1P00973 400 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 CISD3P0C7P0 127 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 WT1P19544 449 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 ACO1P21399 889 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 CYP2F1P24903 491 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 CDC27P30260 824 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 SLC5A2P31639 672 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 PPP3CCP48454 512 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 MLLT10P55197 1068 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 NXPH1P58417 271 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 KLRB1Q12918 225 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 KIAA0895LQ68EN5 471 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 NCAPH2Q6IBW4 605 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 TIPARPQ7Z3E1 657 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 HEATR4Q86WZ0 1026 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 METTL23Q86XA0 190 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 FAM114A1Q8IWE2 563 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 OR4C6Q8NH72 309 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 C9orf43Q8TAL5 461 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 HAS1Q92839 578 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 EIF2AK1Q9BQI3 630 aaKnown RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 ABCG4Q9H172 646 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 LHX5Q9H2C1 402 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 TMEM245Q9H330 911 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 SGK2Q9HBY8 427 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 ZNF71Q9NQZ8 489 aaPredicted RBP7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 SMPD4Q9NXE4 827 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 TRPM5Q9NZQ8 1165 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 SEPT10Q9P0V9 454 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 LRWD1Q9UFC0 647 aa7.06□□□□□ -1.28
HERPUD1-217ENST00000569429 UBE4BO95155 1302 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 ZNF106Q9H2Y7 1883 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 CCDC187A0A096LP49 1063 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 TTC26A0AVF1 554 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 ZNF840PA6NDX5 716 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 TLR4O00206 839 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 SLC6A4P31645 630 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 HARS2P49590 506 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 NLRP5P59047 1200 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 TSPY1Q01534 308 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 E2F5Q15329 346 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 HS1BP3Q53T59 392 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 FOXR1Q6PIV2 292 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 MPZL3Q6UWV2 235 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 SPNS3Q6ZMD2 512 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 ZGRF1Q86YA3 2104 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 RDH13Q8NBN7 331 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 MAPK15Q8TD08 544 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 MARVELD3Q96A59 401 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 CEP295NLQ96MC4 621 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 HEXIM2Q96MH2 286 aaKnown RBP7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 TSPAN18Q96SJ8 248 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 KIFC3Q9BVG8 833 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 SLC12A9Q9BXP2 914 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 LRRC2Q9BYS8 371 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 TRIM9Q9C026 710 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 GZF1Q9H116 711 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 OSBPL2Q9H1P3 480 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 OSBPL3Q9H4L5 887 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 USP29Q9HBJ7 922 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 MARK1Q9P0L2 795 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 PHTF1Q9UMS5 762 aa7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 MAP1AP78559 2803 aaPredicted RBP7.05□□□□□ -1.28
HERPUD1-217ENST00000569429 C10orf142B7Z368 130 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms