RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 CTNNBL1Q8WYA6 563 aaPredicted RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 MFSD1Q9H3U5 465 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 TASP1Q9H6P5 420 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 POPDC2Q9HBU9 364 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 OLA1Q9NTK5 396 aaKnown RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 SPTLC3Q9NUV7 552 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 ASNSD1Q9NWL6 643 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 TAS2R14Q9NYV8 317 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 GDE1Q9NZC3 331 aa16.78■□□□□ 0.28
USB1-215ENST00000569252 ZFP37Q9Y6Q3 630 aaPredicted RBP16.78■□□□□ 0.28
USB1-215ENST00000569252 DMXL1Q9Y485 3027 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 PTPRDP23468 1912 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 SOWAHDA6NJG2 315 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 YJEFN3A6XGL0 299 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 EIF3CLB5ME19 914 aaKnown RBP16.77■□□□□ 0.28
USB1-215ENST00000569252 E7ENQ6 273 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 PROB1E7EW31 1015 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 KRT3P12035 628 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 NCAM1P13591 858 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 GJA1P17302 382 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 HDCP19113 662 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 ABCB4P21439 1286 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 SCNN1AP37088 669 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 ASTE1Q2TB18 679 aaPredicted RBP16.77■□□□□ 0.28
USB1-215ENST00000569252 C2CD6Q53TS8 623 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 PRSS36Q5K4E3 855 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 C10orf120Q5SQS8 335 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 PHLDB2Q86SQ0 1253 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 XYLT1Q86Y38 959 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 UBALD2Q8IYN6 164 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 MAB21L3Q8N8X9 362 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 SHKBP1Q8TBC3 707 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 CLEC4CQ8WTT0 213 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 NDRG1Q92597 394 aaKnown RBP16.77■□□□□ 0.28
USB1-215ENST00000569252 ZNF653Q96CK0 615 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 TCEAL4Q96EI5 215 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 MCRS1Q96EZ8 462 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 EIF3CQ99613 913 aaKnown RBP16.77■□□□□ 0.28
USB1-215ENST00000569252 IL21Q9HBE4 155 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 MYO1AQ9UBC5 1043 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 CNOT8Q9UFF9 292 aaKnown RBP16.77■□□□□ 0.28
USB1-215ENST00000569252 SCINQ9Y6U3 715 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 COL4A3Q01955 1670 aa16.77■□□□□ 0.28
USB1-215ENST00000569252 DPYSL4O14531 572 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 ARHGAP6O43182 974 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 TLR5O60602 858 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 NDUFA10O95299 355 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 CKMP06732 381 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 ZDHHC11BP0C7U3 371 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 GBP1P32455 592 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 NBL1P41271 181 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 TUBP50607 506 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 CYP4F8P98187 520 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 TXNDC8Q6A555 127 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 MON1BQ7L1V2 547 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 C3orf20Q8ND61 904 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 ITFG1Q8TB96 612 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 ING5Q8WYH8 240 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 PDLIM2Q96JY6 352 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 TMEM51Q9NW97 253 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.76■□□□□ 0.27
USB1-215ENST00000569252 DNMT3LQ9UJW3 386 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 CDH7Q9ULB5 785 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 STAP1Q9ULZ2 295 aa16.76■□□□□ 0.27
USB1-215ENST00000569252 ZNF292O60281 2723 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 SIGLEC16A6NMB1 481 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 GRAP2O75791 330 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 GABBR2O75899 941 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 MBL2P11226 248 aaPredicted RBP16.75■□□□□ 0.27
USB1-215ENST00000569252 CEBPBP17676 345 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 FECHP22830 423 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 RRM1P23921 792 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 CCR2P41597 374 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 KPNA1P52294 538 aaPredicted RBP16.75■□□□□ 0.27
USB1-215ENST00000569252 GALCP54803 685 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 SLC5A9Q2M3M2 681 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 DCAF6Q58WW2 860 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 OLFML1Q6UWY5 402 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 BEND5Q7L4P6 421 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 SLC26A9Q7LBE3 791 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 SCD5Q86SK9 330 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 KIAA1328Q86T90 577 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 ZDHHC14Q8IZN3 488 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 PLCD3Q8N3E9 789 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 ZNF276Q8N554 614 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 EDEM1Q92611 657 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 FGF13Q92913 245 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 NMUR1Q9HB89 426 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.75■□□□□ 0.27
USB1-215ENST00000569252 RRN3Q9NYV6 651 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 TJP2Q9UDY2 1190 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 INTUQ9ULD6 942 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 USTQ9Y2C2 406 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 PCDHA13Q9Y5I0 950 aa16.75■□□□□ 0.27
USB1-215ENST00000569252 NOS2P35228 1153 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 GSCP56915 257 aaPredicted RBP16.74■□□□□ 0.27
USB1-215ENST00000569252 EFEMP1Q12805 493 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 PTP4A2Q12974 167 aa16.74■□□□□ 0.27
USB1-215ENST00000569252 SND1Q7KZF4 910 aaKnown RBP eCLIP16.74■□□□□ 0.27
USB1-215ENST00000569252 TMEM150AQ86TG1 271 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms