RNA–Protein interactions for RNA: ENST00000568949.1

SNX29-207, Transcript of sorting nexin 29, humanhuman

TSL 3

Gene SNX29, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX29-207ENST00000568949 FUT11Q495W5 492 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 STXBP4Q6ZWJ1 553 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 FAM35AQ86V20 835 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 RHBDD1Q8TEB9 315 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 UBL7Q96S82 380 aaPredicted RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 GPR174Q9BXC1 333 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 KLF16Q9BXK1 252 aaPredicted RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 MIR1-1HGQ9H1L0 117 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 DMAP1Q9NPF5 467 aaPredicted RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 PANK4Q9NVE7 773 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 HSPBP1Q9NZL4 362 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 LSM7Q9UK45 103 aaKnown RBP13.19□□□□□ -0.3
SNX29-207ENST00000568949 FBXO10Q9UK96 956 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 STON1Q9Y6Q2 735 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 MYH10P35580 1976 aa13.19□□□□□ -0.3
SNX29-207ENST00000568949 LOC400499M0QZD8 3231 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 WASH3PC4AMC7 463 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 E9PAM4 449 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 TK2O00142 265 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 ZIC2O95409 532 aaPredicted RBP13.18□□□□□ -0.3
SNX29-207ENST00000568949 IGLV3-19P01714 112 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 TNNI1P19237 187 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 ATICP31939 592 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 TXLNAP40222 546 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 BNC1Q01954 994 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 ENPP2Q13822 863 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 SUZ12Q15022 739 aaKnown RBP13.18□□□□□ -0.3
SNX29-207ENST00000568949 DCAF12L1Q5VU92 463 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 TPGS1Q6ZTW0 290 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 PAQR9Q6ZVX9 377 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 PDCD7Q8N8D1 485 aaKnown RBP13.18□□□□□ -0.3
SNX29-207ENST00000568949 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 PCED1AQ9H1Q7 454 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 FBXO44Q9H4M3 255 aa13.18□□□□□ -0.3
SNX29-207ENST00000568949 ASH1LQ9NR48 2969 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 KCNJ18B7U540 433 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 TNFSF14O43557 240 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 DLATP10515 647 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 ATP5C1P36542 298 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 TPMTP51580 245 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 PSMD6Q15008 389 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 E2F5Q15329 346 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 SMAD1Q15797 465 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 CCDC73Q6ZRK6 1079 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 TMPRSS6Q8IU80 811 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 CCDC65Q8IXS2 484 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 C1orf216Q8TAB5 229 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 SYAP1Q96A49 352 aaPredicted RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 TNIP3Q96KP6 325 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 MED10Q9BTT4 135 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 NUP58Q9BVL2 599 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 TRIM9Q9C026 710 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 MKRN2Q9H000 416 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 CYLDQ9NQC7 956 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 TLR8Q9NR97 1041 aaKnown RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 THAP10Q9P2Z0 257 aaPredicted RBP13.17□□□□□ -0.3
SNX29-207ENST00000568949 SLC27A6Q9Y2P4 619 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 CKAP5Q14008 2032 aa13.17□□□□□ -0.3
SNX29-207ENST00000568949 AP1G2O75843 785 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 TBX18O95935 607 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 ACO1P21399 889 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 PGFP49763 221 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 MYL6P60660 151 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 TRPC3Q13507 836 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 SNRNP35Q16560 246 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 PTPRNQ16849 979 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 LARP1BQ659C4 914 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 KLHDC10Q6PID8 442 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 Q6ZNB5 142 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 FUKQ8N0W3 1084 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 ZMIZ2Q8NF64 920 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 ENGASEQ8NFI3 743 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 UCMAQ8WVF2 138 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 PRCCQ92733 491 aaPredicted RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 SIPA1Q96FS4 1042 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 TMX3Q96JJ7 454 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 VRTNQ9H8Y1 702 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 CSNK1G1Q9HCP0 422 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 NXF1Q9UBU9 619 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 EIF2B4Q9UI10 523 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 FBXO2Q9UK22 296 aaPredicted RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 SRPRBQ9Y5M8 271 aaKnown RBP13.16□□□□□ -0.3
SNX29-207ENST00000568949 CELSR3Q9NYQ7 3312 aa13.16□□□□□ -0.3
SNX29-207ENST00000568949 PTPRQQ9UMZ3 2332 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 A0A1B0GVT2 93 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 PCDHGA12O60330 932 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 SYNCRIPO60506 623 aaKnown RBP13.15□□□□□ -0.3
SNX29-207ENST00000568949 HOXD13P35453 343 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 STAT6P42226 847 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 IL12RB1P42701 662 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 ABCG1P45844 678 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 PLA2G4AP47712 749 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 AFF3P51826 1226 aaKnown RBP13.15□□□□□ -0.3
SNX29-207ENST00000568949 CYP24A1Q07973 514 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 RABEP1Q15276 862 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 MARCH9Q86YJ5 346 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 RDH13Q8NBN7 331 aa13.15□□□□□ -0.3
SNX29-207ENST00000568949 SLC39A7Q92504 469 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms