RNA–Protein interactions for RNA: ENST00000568883.5

PKM-222, Transcript of pyruvate kinase M1/2, human

TSL 5 BASIC

Gene PKM, Length 1,863 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PKM-222	ENST00000568883	CSDE1	O75534	798 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	STK10	O94804	968 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	ITGBL1	O95965	494 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	T-ENOL	P0DO92	83 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	FGFR1	P11362	822 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	IBSP	P21815	317 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CALB2	P22676	271 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CCNF	P41002	786 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	BCAT1	P54687	386 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	BST2	Q10589	180 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SNAPC2	Q13487	334 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	KRT72	Q14CN4	511 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	PPP6R3	Q5H9R7	873 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	FAM91A1	Q658Y4	838 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	TAPT1	Q6NXT6	567 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SLC27A1	Q6PCB7	646 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SH2D5	Q6ZV89	423 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	CYS1	Q717R9	158 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	SLC26A9	Q7LBE3	791 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	ACOT1	Q86TX2	421 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	TTC30A	Q86WT1	665 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	C12orf29	Q8N999	325 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	GPRC5A	Q8NFJ5	357 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	UTP4	Q969X6	686 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	OPTN	Q96CV9	577 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	C7orf26	Q96N11	449 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	R3HDML	Q9H3Y0	253 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	TUT1	Q9H6E5	874 aa	Known RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	RCOR3	Q9P2K3	495 aa	Predicted RBP	13.14	□□□□□ -0.31
PKM-222	ENST00000568883	HEY2	Q9UBP5	337 aa		13.14	□□□□□ -0.31
PKM-222	ENST00000568883	ZSWIM8	A7E2V4	1837 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	RRN3P2	A6NIE6	340 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	PAPSS1	O43252	624 aa	Predicted RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	DIAPH2	O60879	1101 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CBX6	O95503	412 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CD4	P01730	458 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	FDFT1	P37268	417 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	MTM1	Q13496	603 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CRYM	Q14894	314 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	GRIK4	Q16099	956 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	ZNF792	Q3KQV3	632 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	ACCSL	Q4AC99	568 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	HEATR6	Q6AI08	1181 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CAND1	Q86VP6	1230 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CCNJL	Q8IV13	435 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	PSTK	Q8IV42	348 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	FAM13C	Q8NE31	585 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	OR6B3	Q8NGW1	331 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	RFWD2	Q8NHY2	731 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CDCA5	Q96FF9	252 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	NSL1	Q96IY1	281 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	PIWIL1	Q96J94	861 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	SNX27	Q96L92	541 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	ZNF560	Q96MR9	790 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	QKI	Q96PU8	341 aa	Known RBP eCLIP	13.13	□□□□□ -0.31	7e-9	■■■□□ 15.1
PKM-222	ENST00000568883	EBNA1BP2	Q99848	306 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	SGIP1	Q9BQI5	828 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	MRPL45	Q9BRJ2	306 aa	Known RBP	13.13	□□□□□ -0.31
PKM-222	ENST00000568883	C16orf70	Q9BSU1	422 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	TMEM120A	Q9BXJ8	343 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	GPATCH2L	Q9NWQ4	482 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	KCNK4	Q9NYG8	393 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	CNTN3	Q9P232	1028 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	PLLP	Q9Y342	182 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	ANK1	P16157	1881 aa		13.13	□□□□□ -0.31
PKM-222	ENST00000568883	SLC15A5	A6NIM6	579 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883		A8MXQ7	604 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	BIRC5	O15392	142 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	STRN	O43815	780 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	AVIL	O75366	819 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	NPTXR	O95502	500 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MLN	P12872	115 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	BGN	P21810	368 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	ARL4A	P40617	200 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	PNPLA4	P41247	253 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MAGEA3	P43357	314 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	HDAC4	P56524	1084 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	C1QTNF8	P60827	252 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	OVGP1	Q12889	678 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	NAB1	Q13506	487 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	NOTUM	Q6P988	496 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	STRADA	Q7RTN6	431 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	SCUBE3	Q8IX30	993 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	ENDOV	Q8N8Q3	282 aa	Known RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MAB21L3	Q8N8X9	362 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	ANKRD52	Q8NB46	1076 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	CENPI	Q92674	756 aa	Predicted RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	CDKL2	Q92772	493 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	SKA1	Q96BD8	255 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	BTBD10	Q9BSF8	475 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	DHX35	Q9H5Z1	703 aa	Known RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	FAM49B	Q9NUQ9	324 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	13.12	□□□□□ -0.31	1e-9	■□□□□ 11.2
PKM-222	ENST00000568883	GTF2IRD1	Q9UHL9	959 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	UBQLN1	Q9UMX0	589 aa	Known RBP	13.12	□□□□□ -0.31
PKM-222	ENST00000568883	AP4E1	Q9UPM8	1137 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	MAD1L1	Q9Y6D9	718 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	OTOF	Q9HC10	1997 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	FAM159B	A6NKW6	160 aa		13.12	□□□□□ -0.31
PKM-222	ENST00000568883	PIAS1	O75925	651 aa		13.12	□□□□□ -0.31

Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms