RNA–Protein interactions for RNA: ENST00000568626.1

FANCA-231, Transcript of FA complementation group A, humanhuman

TSL 3

Gene FANCA, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-231ENST00000568626 FNIP1Q8TF40 1166 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 RFFLQ8WZ73 363 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 NDRG1Q92597 394 aaKnown RBP12.55□□□□□ -0.4
FANCA-231ENST00000568626 FGF13Q92913 245 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 ACSF2Q96CM8 615 aaPredicted RBP12.55□□□□□ -0.4
FANCA-231ENST00000568626 CALR3Q96L12 384 aaKnown RBP12.55□□□□□ -0.4
FANCA-231ENST00000568626 SERPINB11Q96P15 392 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 MCEEQ96PE7 176 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 KIF9Q9HAQ2 790 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.55□□□□□ -0.4
FANCA-231ENST00000568626 CDH22Q9UJ99 828 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 DNMT3LQ9UJW3 386 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 NR2E1Q9Y466 385 aa12.55□□□□□ -0.4
FANCA-231ENST00000568626 HELZP42694 1942 aaKnown RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 A0A0A6YYK5 440 aaPredicted RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 FAM170AA1A519 330 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 C2CD4BA6NLJ0 364 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 ATMINO43313 823 aaPredicted RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 COCHO43405 550 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 GRAP2O75791 330 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 FYNP06241 537 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 GJA1P17302 382 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 HDCP19113 662 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 GPD1P21695 349 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 PTPN9P43378 593 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 SLC7A9P82251 487 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 TAF5Q15542 800 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 DCAF6Q58WW2 860 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 TJAP1Q5JTD0 557 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 PTCRAQ6ISU1 281 aaPredicted RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 DDX42Q86XP3 938 aaKnown RBP eCLIP12.54□□□□□ -0.4
FANCA-231ENST00000568626 CMTM8Q8IZV2 173 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 DEFB106AQ8N104 65 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 MAB21L3Q8N8X9 362 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 TDRD5Q8NAT2 981 aaKnown RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 ACRBPQ8NEB7 543 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 FEZF2Q8TBJ5 459 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 ZNF564Q8TBZ8 553 aaPredicted RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 DQX1Q8TE96 717 aaKnown RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 ING5Q8WYH8 240 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 EDEM1Q92611 657 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 KHSRPQ92945 711 aaKnown RBP eCLIP12.54□□□□□ -0.4
FANCA-231ENST00000568626 DESI2Q9BSY9 194 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 NUP85Q9BW27 656 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 PHF7Q9BWX1 381 aaPredicted RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 PACSIN1Q9BY11 444 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 TSGA10Q9BZW7 698 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 CCSER2Q9H7U1 834 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 FAM204AQ9H8W3 233 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 OSER1Q9NX31 292 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 MARCH2Q9P0N8 246 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 CTTNBP2NLQ9P2B4 639 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 MYO1AQ9UBC5 1043 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 ARHGAP26Q9UNA1 814 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 REXO2Q9Y3B8 237 aaKnown RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 HBS1LQ9Y450 684 aaKnown RBP12.54□□□□□ -0.4
FANCA-231ENST00000568626 PAXBP1Q9Y5B6 917 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 DOCK6Q96HP0 2047 aa12.54□□□□□ -0.4
FANCA-231ENST00000568626 NCOR1O75376 2440 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 C2orf78A6NCI8 922 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 BTNL10A8MVZ5 291 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 DPYSL4O14531 572 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 PJA2O43164 708 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 MTA2O94776 668 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 F9P00740 461 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 MBL2P11226 248 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 TCF3P15923 654 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 PDGFRAP16234 1089 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 GBP1P32455 592 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 GBP2P32456 591 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 RFC1P35251 1148 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 FLT3P36888 993 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 PGFP49763 221 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 ZNF143P52747 638 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 RNASE9P60153 205 aaKnown RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 COG7P83436 770 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 EFEMP1Q12805 493 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 KIF5AQ12840 1032 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 MTA1Q13330 715 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 SLC25A52Q3SY17 297 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 STXBP5Q5T5C0 1151 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 MTSS1LQ765P7 747 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 DNAAF5Q86Y56 855 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 KIAA1958Q8N8K9 716 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 ZSCAN18Q8TBC5 510 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 SMARCD2Q92925 531 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 NT5C3BQ969T7 300 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 E2F7Q96AV8 911 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 ARHGEF26Q96DR7 871 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 PGAP3Q96FM1 320 aaPredicted RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 NPY6RQ99463 290 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 NCAPGQ9BPX3 1015 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 DDX23Q9BUQ8 820 aaKnown RBP12.53□□□□□ -0.4
FANCA-231ENST00000568626 SLC46A2Q9BY10 475 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 KCNF1Q9H3M0 494 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 TRPV4Q9HBA0 871 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 OBP2AQ9NY56 170 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 EPS15L1Q9UBC2 864 aa12.53□□□□□ -0.4
FANCA-231ENST00000568626 RASAL2Q9UJF2 1139 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms