RNA–Protein interactions for RNA: ENST00000568294.5

HDGFL3-206, Transcript of HDGF like 3, humanhuman

TSL 4

Gene HDGFL3, Length 3,397 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-206ENST00000568294 PLA2G6O60733 806 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SNRPAP09012 282 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 IQCF3P0C7M6 154 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SKIP12755 728 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TCN1P20061 433 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SDC4P31431 198 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 MLH1P40692 756 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SKIV2L2P42285 1042 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CACNA2D1P54289 1103 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 GRAMD1BQ3KR37 738 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 FAM160B1Q5W0V3 765 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC4A11Q8NBS3 891 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TRPM4Q8TD43 1214 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TMEM176AQ96HP8 235 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 KCNK13Q9HB14 408 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SIX4Q9UIU6 781 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 PPM1HQ9ULR3 514 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 GREB1LQ9C091 1923 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 KCNK1O00180 336 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TBC1D12O60347 775 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SP100P23497 879 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CCDC15Q0P6D6 951 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 IFRD2Q12894 506 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 USP4Q13107 963 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 NME3Q13232 169 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 STX3Q13277 289 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CUL3Q13618 768 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CTC1Q2NKJ3 1217 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TTC39BQ5VTQ0 682 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 UNC5AQ6ZN44 842 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CTU1Q7Z7A3 348 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SH3TC2Q8TF17 1288 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SEPT1Q8WYJ6 367 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SNRNP25Q9BV90 132 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 PNPOQ9NVS9 261 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 BTBD7Q9P203 1132 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 MTO1Q9Y2Z2 717 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 KIF13BQ9NQT8 1826 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 hCG_2014768A0A024R1R8 64 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 A6NJR5 290 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 ATP9BO43861 1147 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 DLDP09622 509 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 ERVK-10P10266 1014 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CCDC130P13994 396 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 EIF4BP23588 611 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNF132P52740 706 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC34A1Q06495 639 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 FASTKD1Q53R41 847 aaKnown RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 N4BP2L1Q5TBK1 243 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 NXNQ6DKJ4 435 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 MPZL3Q6UWV2 235 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SCUBE1Q8IWY4 988 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 TP53INP2Q8IXH6 220 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 SLC44A1Q8WWI5 657 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 OXCT2Q9BYC2 517 aaPredicted RBP9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 FOXP3Q9BZS1 431 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 XYLT2Q9H1B5 865 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 ETNK2Q9NVF9 386 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 NDE1Q9NXR1 346 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 CACNG4Q9UBN1 327 aa9.29□□□□□ -0.92
HDGFL3-206ENST00000568294 COL11A2P13942 1736 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 TM9SF1O15321 606 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 BAG6P46379 1132 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 GLRBP48167 497 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 ZRSR2Q15696 482 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 FAM219BQ5XKK7 198 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 DCAF15Q66K64 600 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PMF1Q6P1K2 205 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 TDRPQ86YL5 185 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PLD5Q8N7P1 536 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 AGBL3Q8NEM8 1001 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 RDM1Q8NG50 284 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 TRIM4Q9C037 500 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 CAB39LQ9H9S4 337 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 RSAD1Q9HA92 442 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 SYNPO2Q9UMS6 1093 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 MAFBQ9Y5Q3 323 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNFX1Q9P2E3 1918 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 COL4A5P29400 1685 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 CCDC189A1A4V9 331 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 MAGEB2O15479 319 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PROCP04070 461 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 CYP2F1P24903 491 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 MGAT1P26572 445 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 AVPR1AP37288 418 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 MRPS5P82675 430 aaKnown RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 ITGA9Q13797 1035 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PRKD1Q15139 912 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 WASHC2DQ5SRD0 308 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PPP1R26Q5T8A7 1209 aaPredicted RBP9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 KCNT2Q6UVM3 1135 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 ULK2Q8IYT8 1036 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 SPATA6LQ8N4H0 392 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 PCDH19Q8TAB3 1148 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 ZNF333Q96JL9 665 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 VCXQ9H320 206 aa9.28□□□□□ -0.92
HDGFL3-206ENST00000568294 DPEP3Q9H4B8 488 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms