RNA–Protein interactions for RNA: ENST00000568239.1

SMG1-215, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 1 (best)

Gene SMG1, Length 2,978 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-215ENST00000568239 TEKT4Q8WW24 435 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PWWP2AQ96N64 755 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FAM204AQ9H8W3 233 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 MED4Q9NPJ6 270 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 DDIT4Q9NX09 232 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 BCCIPQ9P287 314 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG1-215ENST00000568239 EFR3BQ9Y2G0 817 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 LAMA3Q16787 3333 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 HHLA1C9JL84 531 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 APOL1O14791 398 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 MDM4O15151 490 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 OPA1O60313 960 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 RDXP35241 583 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 ARL4AP40617 200 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ALDH7A1P49419 539 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 MNX1P50219 401 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 SLC5A3P53794 718 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 GDF10P55107 478 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 MTMR3Q13615 1198 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 IKBKEQ14164 716 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 DDR2Q16832 855 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 BSPRYQ5W0U4 402 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 KCTD16Q68DU8 428 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ARCQ7LC44 396 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 TMEM173Q86WV6 379 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 DCP1BQ8IZD4 617 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 MREGQ8N565 214 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ALLCQ8N6M5 410 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FAM71DQ8N9W8 422 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ATAD1Q8NBU5 361 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 SLC35B2Q8TB61 432 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FAM71BQ8TC56 605 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 GPR152Q8TDT2 470 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 CENPIQ92674 756 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 ART4Q93070 314 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ZNF333Q96JL9 665 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 MRPL9Q9BYD2 267 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 CSNK1G1Q9HCP0 422 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PIGVQ9NUD9 493 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.35□□□□□ -1.23
SMG1-215ENST00000568239 WHRNQ9P202 907 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 GOLGA6L10A6NI86 522 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 TMEM189-UBE2V1I3L0A0 370 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 C2CD2LO14523 706 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 OAZ2O95190 189 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FYNP06241 537 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 ITGAVP06756 1048 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 GOT1P17174 413 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 IL4RP24394 825 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 L1CAMP32004 1257 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 GPR15P49685 360 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 NRLP54845 237 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 OASLQ15646 514 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 UAP1Q16222 522 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 RAB41Q5JT25 222 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 FUT10Q6P4F1 479 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 DRICH1Q6PGQ1 229 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 IQCKQ8N0W5 287 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PLD5Q8N7P1 536 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 PCDH19Q8TAB3 1148 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 NKD2Q969F2 451 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 TOX2Q96NM4 488 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 C11orf84Q9BUA3 381 aaPredicted RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 SEMA4AQ9H3S1 761 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 NUDT5Q9UKK9 219 aa7.35□□□□□ -1.23
SMG1-215ENST00000568239 DRG1Q9Y295 367 aaKnown RBP7.35□□□□□ -1.23
SMG1-215ENST00000568239 SF3B1O75533 1304 aaKnown RBP eCLIP7.34□□□□□ -1.23
SMG1-215ENST00000568239 TSC2P49815 1807 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SMIM23A6NLE4 172 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 GOLGA8MH3BSY2 632 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SYN3O14994 580 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SOAT2O75908 522 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ENDOD1O94919 500 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 GALTP07902 379 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 CLTBP09497 229 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 AMPD1P23109 780 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 IVDP26440 423 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 KLRC2P26717 231 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ACTN2P35609 894 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 CHKAP35790 457 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ROR1Q01973 937 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 NFE2Q16621 373 aaPredicted RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 TAZQ16635 292 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 DNAJC21Q5F1R6 531 aaKnown RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 EFHC2Q5JST6 749 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SYCP2LQ5T4T6 812 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 ZNF280DQ6N043 979 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 FBXO46Q6PJ61 603 aaPredicted RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 UNC45BQ8IWX7 931 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 LRRC43Q8N309 656 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PLCD3Q8N3E9 789 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 NETO2Q8NC67 525 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 CCHCR1Q8TD31 782 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PIK3R5Q8WYR1 880 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SLC2A13Q96QE2 648 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 KCTD15Q96SI1 283 aaPredicted RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 NPY6RQ99463 290 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 PKMYT1Q99640 499 aa7.34□□□□□ -1.23
SMG1-215ENST00000568239 SEPT5Q99719 369 aaPredicted RBP7.34□□□□□ -1.23
SMG1-215ENST00000568239 ZNF670Q9BS34 389 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms