RNA–Protein interactions for RNA: ENST00000568205.1

SPG7-218, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 463 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-218ENST00000568205 MDM4O15151 490 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 MBL2P11226 248 aaPredicted RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 NOS2P35228 1153 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 ATP5C1P36542 298 aaKnown RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 AVPR1AP37288 418 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 MATKP42679 507 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 KRT83P78385 493 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 SLC7A9P82251 487 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 EFEMP1Q12805 493 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 DCAF6Q58WW2 860 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 SYPL2Q5VXT5 272 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 DCUN1D2Q6PH85 259 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 EMC1Q8N766 993 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 ZSCAN18Q8TBC5 510 aaPredicted RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 DQX1Q8TE96 717 aaKnown RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 MCEEQ96PE7 176 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 CYP2S1Q96SQ9 504 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 DESI2Q9BSY9 194 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 PHF7Q9BWX1 381 aaPredicted RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 RNF38Q9H0F5 515 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 KCNF1Q9H3M0 494 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 SMOC2Q9H3U7 446 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 MRPL47Q9HD33 250 aaKnown RBP16.42■□□□□ 0.22
SPG7-218ENST00000568205 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.42■□□□□ 0.22
SPG7-218ENST00000568205 DNMT3LQ9UJW3 386 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 GREB1Q4ZG55 1949 aa16.42■□□□□ 0.22
SPG7-218ENST00000568205 C2orf16Q68DN1 1984 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 C2CD4BA6NLJ0 364 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 LAMP2P13473 410 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 IL9P15248 144 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 WEE1P30291 646 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 RFC1P35251 1148 aaPredicted RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 RPL7AP62424 266 aaKnown RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 FAM78AQ5JUQ0 283 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 TRNP1Q6NT89 227 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 ARID3BQ8IVW6 561 aaPredicted RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 RXFP2Q8WXD0 754 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 SMARCD2Q92925 531 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 ACSF2Q96CM8 615 aaPredicted RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 DDX23Q9BUQ8 820 aaKnown RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 NUP85Q9BW27 656 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 SMG9Q9H0W8 520 aaKnown RBP16.41■□□□□ 0.22
SPG7-218ENST00000568205 RRN3Q9NYV6 651 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 MARCH2Q9P0N8 246 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 EPS15L1Q9UBC2 864 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 RASAL2Q9UJF2 1139 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 STAP1Q9ULZ2 295 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 ARHGAP26Q9UNA1 814 aa16.41■□□□□ 0.22
SPG7-218ENST00000568205 DOCK6Q96HP0 2047 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 TMEM191CA6NGB0 347 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 PRAMEF12O95522 483 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 PDGFRAP16234 1089 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 SP100P23497 879 aaPredicted RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 SDC4P31431 198 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 KCNQ1P51787 676 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 VAV2P52735 878 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 PITX1P78337 314 aaPredicted RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 TAC4Q86UU9 113 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 MIB1Q86YT6 1006 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 TDRD5Q8NAT2 981 aaKnown RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 RFFLQ8WZ73 363 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 USP13Q92995 863 aaPredicted RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 NT5C3BQ969T7 300 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 ZFRQ96KR1 1074 aaKnown RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 ZNF830Q96NB3 372 aaPredicted RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 ASB16Q96NS5 453 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 NPY6RQ99463 290 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 FAM204AQ9H8W3 233 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 TRPV4Q9HBA0 871 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 SMPD4Q9NXE4 827 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 CTTNBP2NLQ9P2B4 639 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 UVRAGQ9P2Y5 699 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 SFMBT1Q9UHJ3 866 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 NR2E1Q9Y466 385 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 CPQQ9Y646 472 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 ADGRG1Q9Y653 693 aa16.4■□□□□ 0.22
SPG7-218ENST00000568205 SPTBN5Q9NRC6 3674 aaKnown RBP16.4■□□□□ 0.22
SPG7-218ENST00000568205 RCCD1A6NED2 376 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 C2CD4DB7Z1M9 353 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 DPYSL4O14531 572 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 TRUB2O95900 331 aaKnown RBP16.39■□□□□ 0.21
SPG7-218ENST00000568205 GPD1P21695 349 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 PTPN9P43378 593 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 SULT1E1P49888 294 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 SLC25A52Q3SY17 297 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 OTUD1Q5VV17 481 aaPredicted RBP16.39■□□□□ 0.21
SPG7-218ENST00000568205 KIAA1328Q86T90 577 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 TXLNBQ8N3L3 684 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 ZNF564Q8TBZ8 553 aaPredicted RBP16.39■□□□□ 0.21
SPG7-218ENST00000568205 ADAM32Q8TC27 787 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 ATXN2LQ8WWM7 1075 aaKnown RBP16.39■□□□□ 0.21
SPG7-218ENST00000568205 RPGRIP1Q96KN7 1286 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 CFAP57Q96MR6 1250 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 SERPINB11Q96P15 392 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 TBCBQ99426 244 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 KLF16Q9BXK1 252 aaPredicted RBP16.39■□□□□ 0.21
SPG7-218ENST00000568205 TRIM7Q9C029 511 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 KIF9Q9HAQ2 790 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 TDP1Q9NUW8 608 aa16.39■□□□□ 0.21
SPG7-218ENST00000568205 TFR2Q9UP52 801 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms